Gene Ava_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1859 
Symbol 
ID3681811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2312735 
End bp2313472 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID637717200 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_322376 
Protein GI75908080 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTGA ATTCTGATTT AACTACTCAG GACAAAGAGC GCATCATCAA CCCCATTGAA 
CGTCCTACAG TCACTCAAGA CCTTTCGGAA AACGTTATTT TAACCACGGT TGATGACCTC
TACAACTGGG CTAGGCTTTC GAGTCTGTGG CCGTTGTTAT TTGGTACTGC TTGCTGCTTT
ATTGAGTTTG CAGCCCTAAT TGGTTCCCGT TTTGACTTTG ACCGCTTCGG GTTAATTCCC
CGTTCCAGTC CCCGTCAAGC CGATTTGATT ATTACAGCTG GAACAATCAC CATGAAGATG
GCTCCTCAAT TGGTGCGTCT TTATGAACAA ATGCCCGAAC CTAAGTATGT AATTGCGATG
GGCGCTTGTA CAATTACGGG CGGGATGTTC AGTGTCGATT CACCTACAGC TGTGCGTGGA
GTTGACAAGT TAATTCCCGT GGATGTCTAC TTACCTGGTT GTCCTCCCCG TCCTGAAGCA
ATTATCGACG CAATTATTAA GCTGCGGAAG AAGATTGCTA ACGATTCCAT GCAGGAACGG
AGTCTGATTC GCCAAACCCA CCGTTTCTAC AGCACGACTC ATAACTTGAA GCCAGTGGCA
GAAATCTTAA CTGGTAAGTA TATGCAGTCT GAGACTCGCT TCAACCCACC AAAAGAATTG
ACAGAAGCGA TCGGTCTTCC TGTTCCCCCA GCGCTGCTGA CATCACAAAC ACAGAAGGAG
GAACAAAAAC GTGGCTGA
 
Protein sequence
MVLNSDLTTQ DKERIINPIE RPTVTQDLSE NVILTTVDDL YNWARLSSLW PLLFGTACCF 
IEFAALIGSR FDFDRFGLIP RSSPRQADLI ITAGTITMKM APQLVRLYEQ MPEPKYVIAM
GACTITGGMF SVDSPTAVRG VDKLIPVDVY LPGCPPRPEA IIDAIIKLRK KIANDSMQER
SLIRQTHRFY STTHNLKPVA EILTGKYMQS ETRFNPPKEL TEAIGLPVPP ALLTSQTQKE
EQKRG