| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1849 |
|---|
| Symbol | |
|---|
| ID | 3681840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2304259 |
|---|
| End bp | 2305833 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637717189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322366 |
|---|
| Protein GI | 75908070 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.677137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCA TACCACATTA CTTAACTTTT ATCACCGTTA TTTTAGTTGT CATACCATCA
GTAATTACTA TTTTTTTACG GTTCAAACTT TATCAACATC TAGTATCTTT AGAAGAGAAA
GTCAGAAGGT TAATTAATAG ACAGTCACGA GGACAACAGC CAAAAATATT AGAAGAATTA
GAATCTAGGT TTCAGCAGGC TAGTAATAAC TTAGATCAGG TTAATACTGT AGCATTGATA
GACCAAGTTT ATAGTCGAGA AAAGATTAAT GGATTTACCT GTGAACAAAT TGACTATTGG
TGTCGAATTC TTCCTAATTT ACTTTTAGCC TTTGGGTTGC TTGGTACTTT CTTTGGAATT
ACAAGTAATT TAGCAGAAAT TAGTCAAACG ATAAATCAAA ATAATTCTAA TAATGTCAAT
GACTTAGTTT CCGCATTGAA CAAGCCATTA GAAGGTATGA GTATTGCTTT CGTGACTAGT
TTAACAGGAC TTTTGTTTAG TAGTATATTA ACAGTATTTA ACTGGCTAAA AAATACGGGC
TTTGCTAAAT ATAGACTTAT TAGTAGTCTT GAAGATTATC TAGATAATAT TTATCAACCA
GAAATCCAAG GTGATACTCG TCTCGATAAA ATAGTCAATC GAATGGTATC CCAGCAAGAT
GAGTTTTTAA CACGATTTGG TTCTACGGTT CGGGATGCAG TGGAACAATC GCTTGGTAAT
GTAGCTAAAC AAATTGCTCA AGGAAATAAA GAAGCCTCTG ATTTAGCCAA GCAAGTATAT
GAAAGCTTTT ATCAAGCAGC TGGTACTATA TCTACTGCCG CCAGTGAATT TGATCATTCA
ATTCAAGAAT TGAACGCAAA ATCGCAAATA TTTAAACAAT CTGCGGAAAT TTTTGAAAGA
AGCCAGTTTC CTCAGCAGTT GTCAGCAGCT ACAGCAGATT TGAGTAGCAT ACAGTTAAAA
TTTTCGCAGT CGGCTACAAG TCTGGCGGAT ACGGTTAAAT CTTTTGCAAC AGTACTGAGT
GAAGTTCAAA GTTGTAACCA GGAATTAATC AAAATAGGAC TAGATATTCA GAAAGTTAAT
CAAACATCTT TACAAGTATT TGATTTGCAT CAATCTAATC AAGATGCGTT GACAGAGATA
ATACCACAAT TGAAGCAAGG AACTACTAGC TTCTCTAGAG CGATTAATAA GCTGGGGAAA
TTAGAGGAAA GAATTGTGGA TAAAGCAGAT AGTTTTAACA CCGTGGAAGT TACTTTACGG
GAATTATTAT TATCTGTAAA TCAATATACA GAAAAAGCAA ATTCCGGTTT ATCGAATGTA
TCTAAAAAGT TAGAGGACAA TAATCTATCG GTTAATAACT TAGTTAGTAA TGTTGAAGAA
TTGATCAAGC AAATAACTTT TGATTTGAAT ACATTAATTA ATGAAATACA TTCGTTACAG
AATAGTAATA ATGCTTTATT TGTGAAACAT GAAAAAGTAG GCGATCACCT GATAGAAGCA
ATGAACAAAT TGAATAATAT CAATAATAAT ACCTTTGTTT ATAAAGATGT AAATTTAAGT
AATGACCATT CTTGA
|
|---|
| Protein sequence | MPPIPHYLTF ITVILVVIPS VITIFLRFKL YQHLVSLEEK VRRLINRQSR GQQPKILEEL
ESRFQQASNN LDQVNTVALI DQVYSREKIN GFTCEQIDYW CRILPNLLLA FGLLGTFFGI
TSNLAEISQT INQNNSNNVN DLVSALNKPL EGMSIAFVTS LTGLLFSSIL TVFNWLKNTG
FAKYRLISSL EDYLDNIYQP EIQGDTRLDK IVNRMVSQQD EFLTRFGSTV RDAVEQSLGN
VAKQIAQGNK EASDLAKQVY ESFYQAAGTI STAASEFDHS IQELNAKSQI FKQSAEIFER
SQFPQQLSAA TADLSSIQLK FSQSATSLAD TVKSFATVLS EVQSCNQELI KIGLDIQKVN
QTSLQVFDLH QSNQDALTEI IPQLKQGTTS FSRAINKLGK LEERIVDKAD SFNTVEVTLR
ELLLSVNQYT EKANSGLSNV SKKLEDNNLS VNNLVSNVEE LIKQITFDLN TLINEIHSLQ
NSNNALFVKH EKVGDHLIEA MNKLNNINNN TFVYKDVNLS NDHS
|
|---|
| |