Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1843 |
Symbol | |
ID | 3681834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2295446 |
End bp | 2296267 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717183 |
Product | photosystem II manganese-stabilizing protein PsbO |
Protein accession | YP_322360 |
Protein GI | 75908064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTATC GCGCTTTAAT TGTTGCATTC TTGGCTGTGT GCTTGGGGCT ACTAACTGCT TGTAGTGACG CTCCAGCTTC TAGTACCAGA GATATACTGA CTTACGAACA AATTCGAGGC ACTGGCCTGG CTAACAAATG TCCCCAACTT ACAGAAACAA GCCGTGGCTC AATTCCCTTG GATTCCAGCA AGTCCTACGT CATCAAAGAA CTTTGCTTGG AACCAACCAA TTTCTTTGTT AAAGAAGAAC CTGCTAATAA ACGCCAAGCA GCAGAATTTG TAGCTGGCAA ATTGTTAACC AGATACACTT CCACTATTGA CCAGGTGTCA GGTGATCTTA AGTTCAACGA TGATAGCAGC TTGACCTTTG TGGAAAAAGA TGGTCTTGAC TTCCAAGCCA TTACGGTACA ATTACCTGGT GGTGAGCGAG TACCCTTCCT GTTCACCATT AAAAATTTAG TTGCTCAAAC ACAACCTGGT TTAAGCAGTC TAAATACTTC CACAGACTTT GAAGGTACAT TCAAAGTACC TTCTTATCGT GGTGCTGCAT TCTTAGATCC TAAAGGTCGA GGTGTTGTTA GTGGCTATGA TAATGCCGTA GCTCTTCCAG CCCAAGCCGA TGATGAAGAC CTTACCCGTA CTAACGTTAA GCGTGCGGAA ATTCTCAACG GCAAAATTTC TCTACAAATA GCTAAAGTTG ATAGCTCTAG TGGTGAAATT GCTGGTACTT TTGAGAGCGA ACAGCCCTCG GATACTGATT TAGGCGCTGA TGAACCCAAG GAAGTGAAGA TTCGGGGTAT ATTTTACGCT CGTGTTGAGT AA
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Protein sequence | MRYRALIVAF LAVCLGLLTA CSDAPASSTR DILTYEQIRG TGLANKCPQL TETSRGSIPL DSSKSYVIKE LCLEPTNFFV KEEPANKRQA AEFVAGKLLT RYTSTIDQVS GDLKFNDDSS LTFVEKDGLD FQAITVQLPG GERVPFLFTI KNLVAQTQPG LSSLNTSTDF EGTFKVPSYR GAAFLDPKGR GVVSGYDNAV ALPAQADDED LTRTNVKRAE ILNGKISLQI AKVDSSSGEI AGTFESEQPS DTDLGADEPK EVKIRGIFYA RVE
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