Gene Ava_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1843 
Symbol 
ID3681834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2295446 
End bp2296267 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content44% 
IMG OID637717183 
Productphotosystem II manganese-stabilizing protein PsbO 
Protein accessionYP_322360 
Protein GI75908064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTATC GCGCTTTAAT TGTTGCATTC TTGGCTGTGT GCTTGGGGCT ACTAACTGCT 
TGTAGTGACG CTCCAGCTTC TAGTACCAGA GATATACTGA CTTACGAACA AATTCGAGGC
ACTGGCCTGG CTAACAAATG TCCCCAACTT ACAGAAACAA GCCGTGGCTC AATTCCCTTG
GATTCCAGCA AGTCCTACGT CATCAAAGAA CTTTGCTTGG AACCAACCAA TTTCTTTGTT
AAAGAAGAAC CTGCTAATAA ACGCCAAGCA GCAGAATTTG TAGCTGGCAA ATTGTTAACC
AGATACACTT CCACTATTGA CCAGGTGTCA GGTGATCTTA AGTTCAACGA TGATAGCAGC
TTGACCTTTG TGGAAAAAGA TGGTCTTGAC TTCCAAGCCA TTACGGTACA ATTACCTGGT
GGTGAGCGAG TACCCTTCCT GTTCACCATT AAAAATTTAG TTGCTCAAAC ACAACCTGGT
TTAAGCAGTC TAAATACTTC CACAGACTTT GAAGGTACAT TCAAAGTACC TTCTTATCGT
GGTGCTGCAT TCTTAGATCC TAAAGGTCGA GGTGTTGTTA GTGGCTATGA TAATGCCGTA
GCTCTTCCAG CCCAAGCCGA TGATGAAGAC CTTACCCGTA CTAACGTTAA GCGTGCGGAA
ATTCTCAACG GCAAAATTTC TCTACAAATA GCTAAAGTTG ATAGCTCTAG TGGTGAAATT
GCTGGTACTT TTGAGAGCGA ACAGCCCTCG GATACTGATT TAGGCGCTGA TGAACCCAAG
GAAGTGAAGA TTCGGGGTAT ATTTTACGCT CGTGTTGAGT AA
 
Protein sequence
MRYRALIVAF LAVCLGLLTA CSDAPASSTR DILTYEQIRG TGLANKCPQL TETSRGSIPL 
DSSKSYVIKE LCLEPTNFFV KEEPANKRQA AEFVAGKLLT RYTSTIDQVS GDLKFNDDSS
LTFVEKDGLD FQAITVQLPG GERVPFLFTI KNLVAQTQPG LSSLNTSTDF EGTFKVPSYR
GAAFLDPKGR GVVSGYDNAV ALPAQADDED LTRTNVKRAE ILNGKISLQI AKVDSSSGEI
AGTFESEQPS DTDLGADEPK EVKIRGIFYA RVE