Gene Ava_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1827 
Symbol 
ID3681935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2273810 
End bp2274853 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content40% 
IMG OID637717167 
ProductRieske (2Fe-2S) region 
Protein accessionYP_322344 
Protein GI75908048 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTC TGTCCCAAGC TGTGTCTATT CATGATGTCC GTCAATTGGG TATTAACCTG 
AATCATTGGT ATGTAGTTGC ACGTAGTCAG GAAGTCACAA ATAAACCTTT GGGAGTGACA
CTTTGGCATC AGGCGATCGC ACTTTATCGA GATAGCGAAG GACAAATACA CGCCCTAGAA
GACCGTTGCC CACATCGCCA AGTTAAACTT AGTCACGGTC AAGTTATCGG CAATGAGTTG
GAATGTGCTT ATCATGGTTG GCGCTTGAAT CATCATGGTG AATGTGCAGC CGTTCCATAC
TTAGCAGAGA ATCAGAAACT ACCAAACTGC AAAATTCGCC ATTATCCAGT CAAAGAACAA
GACGGTTTTA TTTGGTTATT CCCTGGTGAT GGAGAACCAT CTATAGAGCC AATGGGTTTA
CCAGAGTGGG ATCATTTAAA TTACATTGCT AGTGTTGCCA TTATTAATTG TCAGGCACAT
TATTCTTATT TAATTGAAAA CCTGATGGAT ATGTATCATG GACATTTACA TCAGGATTTA
CAAGCTTGGG CGCAAGCAGA ATTACAAGAT ATTGAGGAAA CCGATGAACG TGTAGATGCT
CATTATCAAG CCCAAAGTTA TTACAAAATA GATAAAATCT GGTCTATCTC CCAATTATTT
TTCCCAGCTT TGCGCCGCTT ACATCCTGAA CCCCTTGATG TGAGTTACAT TTATCCCCAC
TGGATGTCTA CATTAGGAAA AGATTTTAAA ATTTACTGTT TATTGTGTCC GATAAATGAG
ACACAAACCA AAGCTTATTT AATTCATTTC ACATCTTTAA ACGCTTTTTG GCGCTTGCAC
AAATTGCCTG TATGGTTTCG TCGCTTTGTC AAAGATAGTT TGTTTGGTGC AGCCCAGAAA
TTCCTCGATG GGTTGGTGGT TAAAGATGTG CAGATGATTG AAGAAGAACA GCAAGCTTAT
TTACAAAATC CCCAAAGGCG CAATTATGAG TTGAATCGGG CTTTAGTTAG CGTACAGAGG
TTGATGAAAA ATCAAGCATC ATAA
 
Protein sequence
MSSLSQAVSI HDVRQLGINL NHWYVVARSQ EVTNKPLGVT LWHQAIALYR DSEGQIHALE 
DRCPHRQVKL SHGQVIGNEL ECAYHGWRLN HHGECAAVPY LAENQKLPNC KIRHYPVKEQ
DGFIWLFPGD GEPSIEPMGL PEWDHLNYIA SVAIINCQAH YSYLIENLMD MYHGHLHQDL
QAWAQAELQD IEETDERVDA HYQAQSYYKI DKIWSISQLF FPALRRLHPE PLDVSYIYPH
WMSTLGKDFK IYCLLCPINE TQTKAYLIHF TSLNAFWRLH KLPVWFRRFV KDSLFGAAQK
FLDGLVVKDV QMIEEEQQAY LQNPQRRNYE LNRALVSVQR LMKNQAS