Gene Ava_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1796 
Symbol 
ID3681963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2239544 
End bp2240038 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content42% 
IMG OID637717136 
Productmethionine sulfoxide reductase B 
Protein accessionYP_322313 
Protein GI75908017 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCTATTTTTT ACAAACTAGT GCTGCATTAG TTGGCACAGC TTTGTTACCA 
CCTTATATTT TCCAAAGGTC AAGCATTATG GCAGCTTCTA ATACCAAGTT TGAAATCGCC
AAATCTGAAC AAGAATGGCA AACAATATTA ACCCCAGAAC AGTTTCGTGT GTTGCGGAAA
CATGGAACTG AACGTGCTTT CACTAGTTCA CTCGATAAGG AATATAGTGA GGGAACTTAT
GTTTGCGCTG GTTGCGGACA GCCCTTGTTT ACATCCGATA CTAAATTTAA CAGTGGTACT
GGCTGGCCTA GTTTCTTTAC ACCTATTGAA GGTGCAATTG GCACTACTAC CGATAGATCG
TTTTTTATGA CTAGGGTGGA AGTACATTGC AGTCGTTGTG GCGGACATTT AGGTCATGTG
TTTGATGATG GCCCTGCACC CACAGGTAAG CGCTACTGTA TGAATGGTGT ATCGTTAAAG
TTTGAGCCTG CCTAA
 
Protein sequence
MKKRYFLQTS AALVGTALLP PYIFQRSSIM AASNTKFEIA KSEQEWQTIL TPEQFRVLRK 
HGTERAFTSS LDKEYSEGTY VCAGCGQPLF TSDTKFNSGT GWPSFFTPIE GAIGTTTDRS
FFMTRVEVHC SRCGGHLGHV FDDGPAPTGK RYCMNGVSLK FEPA