| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1786 |
|---|
| Symbol | |
|---|
| ID | 3682070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2228955 |
|---|
| End bp | 2231021 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637717126 |
|---|
| Product | oligopeptidase B |
|---|
| Protein accession | YP_322303 |
|---|
| Protein GI | 75908007 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1770] Protease II |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA AGGACAAGAT TTCGCAAAAT CAAATCACGC CACCCATTGC GGATAAACAG
CCCCAAGTTT TAGAATTGCA TGGCGATCGC CGAGTAGATA ATTACTTTTG GATGCGCGAT
ATAGATAATC CAAAGGTAGT GGCATATCTA GAAGCAGAAA ATTCATATAC AAAAGTCATG
ATGCAGCACA CAGAAACGCT GCAAAAAACT CTTTATAATG AAATGCTCTC ACGGATCAAG
GAAACTGATT TATCCGTACC ATATCGCAAG GATAATTATT ATTATTATTC TCGAACTGAA
GCCGGCAAAG ATTATAGAAT TCATTGTCGA AAAGAAGGCA ATTTAGATGC TCCAGAAGAA
GTACTTTTAG ACGAGAATGA GTTAGCTGCC GGACACGATT TTTTTGAATT AGGCATATTT
GCTATTAGCC CCAATCATCA AATACTAGCC TATTCCTATG ACACCAGTGG TTCCGAGCAA
TATACGCTTT TATTTCTTGA CTTAACAAAC CGTGAGTTAT ATCCAGAAAC TATTGCTGAT
ACTTATTTTT CTTTTTGTTG GTGTAATGAT AATCAAACAT CATTTTATAC AAAAATTGAT
GCGGCGAATC GTCCTTACCA GCTTTTTAAG CACACTTTAG GAACACCACC TACACAAGAT
CAATTAATCT ACCATGAACC AGATCATGCT TATGCTTTAT ATGTAGGGAA GACCCGCAGT
CAAGCATATA TATTGATGAC TTTGCAAAGC AGCATCACTA CAGAAGTTCA CTATTTAGAT
GCCAATAATC CTGAGAGTAA CTTTCAGATA ATTTATCCAC GGGAACCTGG AGTAGAATAT
GACGTTGAGC ATCATAGTGA TTACTTTTAT ATAGTCACAA ATAAAGCTGC TACAAACTTT
AAATTAGTAA GAACTCCCCT AACTATGCCA TCCAAGGAGA ATTGGCAAAC TGTTATTCCC
CACCGTGAAG ATGTGCTGTT ATCTGGAGTT AGCCTGTTTA TTAATCACTT AGTCATCTAT
GAAAGAAAAG ATGGCTTACA AACTGCTAGA GTACAAAATA TATCTACAGG TAGTGAAAGT
AATATTATTT TCCCAGAACC AACTTACCAG TTTTATGAAG GGAATAACCC GGAATTTAAT
ACTAATATTT TGCGGTTTAA TTACACTTCT TTGATTACAC CGCCATCTGT GTTTGATTAT
GATATGGAAA CCCACGAGCA GGAGTTAAAA AAACAGACAG AAGTTCTGGG AGACTATGAC
AAAAATCAAT ATCAGAGTGA GTGGTTACTT GCTACTGCTA AAGATGGTAC ACAAATTCCC
ATATCAATTG TGTACAAAAA AGGGATTGAA AAAGATGGGA AAAATCCTTT ACTGCTGACA
GGTTATGGAG CCTATGGTGC ATCTTATCCG GCATCGTTTT CATCAGCTAG ACTAGCATTG
CTAGACCGGG GTATAGTGTT TGCTATTGCC CACATTCGAG GTGGTGAAGA AATGGGGCGC
AAGTGGTATG AAGATGGCAA ATTTTTACAG AAAAAGAACA CCTTTACAGA TTTTATCGCC
TGTGCTGAGT ATTTAATCAA CGAAGGTTGG ACAACAAGCG ATCGCCTAGC TATTACAGGC
GGTAGTGCAG GTGGTTTATT GATGGGAGCG GTGATTAATT TGCGTCCCGA ATTGTTTAAA
GTTGTAGTTG CCGATGTACC TTTTGTAGAT GTAGTGACAA CAATTTTAGA TACATCTTTG
CCCTTATCAG CAATGGAGTG GGAAGAATGG GGTAATCCTA ACGATAAAGT CTACTATGAG
TATATGAAAT CTTACTCACC CTACGATAAT GTCGCAGCCA AAGATTATCC CCATTTGTTA
ATTACTGCTG GCTTAAATGA TTCTCGCGTT AAATATTGGG AACCAGCCAA ATGGACAGCC
AAACTGCGAG AACTCAAAAC AGATGATCAT GTTCTGTTGT TGAAAACTAA CATGGATGCG
GGTCATAGTG GCGCATCTGG ACGTTATGAA AGCCTACGAG AACTTGCTTT TGAGTATGCT
TTTATTTTGG ATCGTTTGGG GTTGTAG
|
|---|
| Protein sequence | MMNKDKISQN QITPPIADKQ PQVLELHGDR RVDNYFWMRD IDNPKVVAYL EAENSYTKVM
MQHTETLQKT LYNEMLSRIK ETDLSVPYRK DNYYYYSRTE AGKDYRIHCR KEGNLDAPEE
VLLDENELAA GHDFFELGIF AISPNHQILA YSYDTSGSEQ YTLLFLDLTN RELYPETIAD
TYFSFCWCND NQTSFYTKID AANRPYQLFK HTLGTPPTQD QLIYHEPDHA YALYVGKTRS
QAYILMTLQS SITTEVHYLD ANNPESNFQI IYPREPGVEY DVEHHSDYFY IVTNKAATNF
KLVRTPLTMP SKENWQTVIP HREDVLLSGV SLFINHLVIY ERKDGLQTAR VQNISTGSES
NIIFPEPTYQ FYEGNNPEFN TNILRFNYTS LITPPSVFDY DMETHEQELK KQTEVLGDYD
KNQYQSEWLL ATAKDGTQIP ISIVYKKGIE KDGKNPLLLT GYGAYGASYP ASFSSARLAL
LDRGIVFAIA HIRGGEEMGR KWYEDGKFLQ KKNTFTDFIA CAEYLINEGW TTSDRLAITG
GSAGGLLMGA VINLRPELFK VVVADVPFVD VVTTILDTSL PLSAMEWEEW GNPNDKVYYE
YMKSYSPYDN VAAKDYPHLL ITAGLNDSRV KYWEPAKWTA KLRELKTDDH VLLLKTNMDA
GHSGASGRYE SLRELAFEYA FILDRLGL
|
|---|
| |