Gene Ava_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1785 
Symbol 
ID3682069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2227591 
End bp2228472 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content34% 
IMG OID637717125 
Productaspartoacylase 
Protein accessionYP_322302 
Protein GI75908006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TCAATCGTGT TGCTATTATT GGTGGTACTC ACGGGAATGA ATTTACAGGC 
GCATTCCTGG TTAAAAAGTT TCAACAGTTT CCTGAAGTAA TCCAAAAACC TAGCTTTGAA
ACCTTAACAA TACTAGGTAA TCCCAAAGCT TTCGAGGCTG GTAAGCGCTA CATTGAAAAA
GATTTAAATC GTTGCTTTTT AACTGAAAGT TTACAAAATC CAAATCTTTC TAGTTATGAA
GACATCAGGG CGAAACAAAT AGCCGGAGTT TTAGGAGAAG AGAATCAACC CAAAGTAGAT
GTAGTTATTG ATTTACACAG TACAACTGCA AATATGGGAT TGAGTATTAT TTTAGGTAAT
CAAGACCCAT TTTTATTAAA GCTATGTGCT TATTTAAGTG AAATTAATCC TTTAGTAAAG
GTTTGCTATA CTATCCCTGA AAAGGGTAGC AATTTTCTGC GCTCTCTTAA TAAACTGGGT
TTTGTGATTG AGGTAGGTGC AGTAGCTCAA GGTGTCTTAA ATGCTGAATT ATTCCAAAAA
ACTGAACAAT TAATATATAC GATTTTGGAT TATGTAGAAA AATATAATCA AGGCAATATT
CCCAAAATCA ATAATTTACT ATCTCTCTAT AAATTTACAG GTACTATTGA CTACCCCAGA
AATGGAAATG GTGACATTCA AGCGATGATT CATCCAGATA TTCAATTTCG AGATTATGCA
CCTCTAAATC CTGGTGATCC TTTGTTTTTA ACCTTAGACG GTAAAGCGAT CGCCTACGAA
GGTACATCGA TAGTTTACCC CATATTTATC AACGAAGCCG CCTATTATGA GAAAGGAATT
GCCATGCTGT TCACCGAAAA GCAACTCATA AATTTTGATT AA
 
Protein sequence
MNKINRVAII GGTHGNEFTG AFLVKKFQQF PEVIQKPSFE TLTILGNPKA FEAGKRYIEK 
DLNRCFLTES LQNPNLSSYE DIRAKQIAGV LGEENQPKVD VVIDLHSTTA NMGLSIILGN
QDPFLLKLCA YLSEINPLVK VCYTIPEKGS NFLRSLNKLG FVIEVGAVAQ GVLNAELFQK
TEQLIYTILD YVEKYNQGNI PKINNLLSLY KFTGTIDYPR NGNGDIQAMI HPDIQFRDYA
PLNPGDPLFL TLDGKAIAYE GTSIVYPIFI NEAAYYEKGI AMLFTEKQLI NFD