| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1771 |
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| Symbol | |
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| ID | 3682114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2207815 |
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| End bp | 2208486 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637717111 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_322288 |
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| Protein GI | 75907992 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.604427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTTCCCC TCTACGACGA AAATCCGACG CGAATTACCC CCTATTTCAC CTACGGTTTA
ATTGGGATGA ACGTTTTAGT TTTTCTTCAC GAAGTGAGTC TATCTAATGC ACAGTTAAAT
CAATTCTTCA GCCAGTATGC AGTAGTCCCT CAAGAGTTAA CCTCCAATTT AGCTGGTGAA
TGGCCGACGT TATTCACCTC ACAATTTTTA CACGGCGGTT GGTGGCACTT GATATCAAAT
ATGGTATTTC TTTGGGTTTT CGGTAACAAT ATCGAAGAAC GCCTGGGACA TTTCAAATAT
TTAATTTTTT ATTTGGCTTG TGGTGCTTTA GCCGCCTTGT GTCAGTGGTT TATTGGGATG
TCTTCCACAA TTCCTTCTTT AGGTGCTAGT GGTGCCATTT CTGGGGTTCT TGGTGCTTAT
CTGATTCGTT TTCCCCAAGC TAGGGTGACA ACTTTAGTGT TCTTAGGTTT CTTTGTGACA
ACAATCAGTG TTCCAGCCCT AGTGATTATT GGTATTTTCT TTGTCCAAAA TGTTATATCC
GGTCTTGTCA GCCTACAAGC AGCCGCTAAC ATGAGTGTAC AAACAGGGGG GGTCGCTTAT
TGGGCGCACA TTGGTGGTTT TGTGTTCGGC ATAATTCTTG CCCCTATATT TGGTTTGTTT
AGACGGGACT AA
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| Protein sequence | MFPLYDENPT RITPYFTYGL IGMNVLVFLH EVSLSNAQLN QFFSQYAVVP QELTSNLAGE
WPTLFTSQFL HGGWWHLISN MVFLWVFGNN IEERLGHFKY LIFYLACGAL AALCQWFIGM
SSTIPSLGAS GAISGVLGAY LIRFPQARVT TLVFLGFFVT TISVPALVII GIFFVQNVIS
GLVSLQAAAN MSVQTGGVAY WAHIGGFVFG IILAPIFGLF RRD
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