Gene Ava_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1763 
Symbol 
ID3682106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2196530 
End bp2197477 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content42% 
IMG OID637717103 
ProductIron permease FTR1 
Protein accessionYP_322280 
Protein GI75907984 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTA GTACTGCTCT ACCTACTTTT GTTATTACAC TCCGAGAAGG AGTAGAAGCC 
GCCTTAGTTG TTGGTATTGT CTTAGCTTTG CTCAAAAAGG CTAAACAATC CCGTCTCAAC
CCTTGGGTGT ATGCTGGTGT CGCCGTTGGT ATCGTTATCA GTGCGCTAAT TGGTGTGCTA
TTCACTTGGG TAATTAAAGC AGTTGGAGCC GCTAATCCTC AATACACGGT GGTAGTGGAA
CCGATGTTAG AAGGCGTGTT TAGTGTGTTG GCGATCGCTA TGCTCAGTTG GATGCTAATC
TGGATGACAA AGCAAGCCAG ATTCATGAAA GCGCAAGTCG AAGGAGCTGT TACAGACGCA
CTTACCCAAA ACTCAAATGC TGGCTGGGGT GTTTTTAGCT TAATTCTCGT TGCCGTTGTC
CGTGAAGGTT TTGAAACAGT ATTATTCATC GCCGCCAATT TTCAGCAAGG ACTTATACCG
ACAATAGGCG CTCTGGCGGG TTTGGCAACA GCAACAGCTA TTGGTGTACT TTTATTTAAA
TTAGGCGTTA AAATTGATAT CCGCCAATTC TTCCAAGTGA TGGGCGTTTT ATTAGTATTA
ATTGTTGCCG GATTAGTTGT TTCCGCCTTA AAACATTTTG ACGATGCTGT AGCCAACTTA
GCTCTTAGCA GCCGCGCCTC AGAAAATCTT TGTTTTTATT ACCAACATTT TACTAAAATT
CACTCTTGTA TTTTAGGGCC TCTGGTTTGG AATACTGAGC AAATATTACC CGATGAACAG
TTTCCTGGTG TAATTCTCAA GTCCTTATTT GGCTACAGAC AACACCTGTA TATTGTAGAA
GCAGTGGGAT ATCTCTTATT TTTAGTAACT GTTGGTGGTT TGTATTTCCG CAGTTTAACT
GGCGGTTCCC CCAAATCTAG TAAAAAGATA TCAGTTGCCC AAAGATAA
 
Protein sequence
MNFSTALPTF VITLREGVEA ALVVGIVLAL LKKAKQSRLN PWVYAGVAVG IVISALIGVL 
FTWVIKAVGA ANPQYTVVVE PMLEGVFSVL AIAMLSWMLI WMTKQARFMK AQVEGAVTDA
LTQNSNAGWG VFSLILVAVV REGFETVLFI AANFQQGLIP TIGALAGLAT ATAIGVLLFK
LGVKIDIRQF FQVMGVLLVL IVAGLVVSAL KHFDDAVANL ALSSRASENL CFYYQHFTKI
HSCILGPLVW NTEQILPDEQ FPGVILKSLF GYRQHLYIVE AVGYLLFLVT VGGLYFRSLT
GGSPKSSKKI SVAQR