Gene Ava_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1754 
Symbol 
ID3682136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2188285 
End bp2188935 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID637717094 
Productcobalt transport protein 
Protein accessionYP_322271 
Protein GI75907975 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0819489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA TGGCTTTGCC GTTACGCTTA CATCTATCCT TGGTGATTGT TGTCGGGACA 
GCCTTACTCA AGCATCACGC TTGGTACTGG TTGAGTGCTT ATGCTGCGAT CGCCTTAATT
TGGGTAGCAG TATTGCGTGT ATCCCTACCC AAATTAGGAG GATTGGTAGG TACAGAATTA
GTCTTCTTAT CAGTAGTAGC ATTGCCCTTG GGATGGGAAA GAGCGAGTTT TTTACTGATT
CGCTCTCTCG TATGTTTAAT CGCCATGAAT AGCTTTCTGT TAACCCTACC ACCCCACAGT
TTTGGCATCG CCCTGAAAAG TTTACCCGTA CCCAGCGCAT TAAAAGAAAA TTTACTTTTG
ACTGGGCAAT ATTTAGAAAT TTTGCTTTCA GAAGTAACAC GTATGCAGCG TAGCGCCCAA
TTACGAGGAC TAAAAGGTGC AGGTGGCTGG TTACGCTACG CTAGTTCCGC CATGATTGGC
ACTTTGTATA TCCGTAGCTT GGAAAGAGCA GAAAGAGTCT ATGCCGCAAT GGTAATTCGC
GGTTATAACG GTCAGTTACC CATAGATTTT ACTTTTAAAG CCAAAGAACG GTTTGCCCTG
ATATTTGCTT GGGCGATCGC TGCTTTTTTT ACCTTCACCT CCTATCTTTA A
 
Protein sequence
MLKMALPLRL HLSLVIVVGT ALLKHHAWYW LSAYAAIALI WVAVLRVSLP KLGGLVGTEL 
VFLSVVALPL GWERASFLLI RSLVCLIAMN SFLLTLPPHS FGIALKSLPV PSALKENLLL
TGQYLEILLS EVTRMQRSAQ LRGLKGAGGW LRYASSAMIG TLYIRSLERA ERVYAAMVIR
GYNGQLPIDF TFKAKERFAL IFAWAIAAFF TFTSYL