Gene Ava_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1753 
Symbol 
ID3682135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2187478 
End bp2188170 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content43% 
IMG OID637717093 
ProductABC transporter-like 
Protein accessionYP_322270 
Protein GI75907974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0198415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTTACG CTTATCCTCA CCAAGAACCA GTTCTGCACA ATATTTCTTT TACATTAAAT 
GCCGGCGATC GCGTAGCGTT GATGGGTGCA ACCGGTTCTG GTAAAAGTAC CTTATTAGAA
AACCTCATTG GCATCAAACA ACCGCAATCA GGCAAAATCT GGATTAACGA TATCTCCTTA
GAACCCCAGA CTTTACCTGA GGTAAGGCGA TACATTGGCT TTGGCTTTCA AGATGCCAAT
GACCAATTAT TTATGCCCAC CATCTTAGAA GATATTACCT TTGGCCCCCT TAACTATGGT
GTACCAGCCC CAATAGCACG GGATCAAGCA CGGCATTTAT TAGCGGATTT CGGTCTAGAA
GCCTATGCTA ACCGTTCAGC ACACGAGCTT TCTGGTGGAC AAAGAAGACT TGCCGCCCTG
GCTGCTATTT TGGCACTAGA GCCTGCTATT TTAATTTTAG ATGAACCTAC TACTGGACTT
GATCCAGCAT GGCGAAGACA CTTAGCAAGA GTTCTATTAA ATTTGCCAGT GCAAGTCATG
TTAATAGCTT CCCATGAACT ACATTGGCTA GGAAAAGTTA CTCAACGCGC CCTAGTACTA
TCCAATGGAC GCATTCAAGT AGACAACGAA ATTCAGCCAC TATTGCAAAA TGGAGAAATT
TTAGAGCAGT TGGGTTTGCC AATAGACTGG TAA
 
Protein sequence
MVYAYPHQEP VLHNISFTLN AGDRVALMGA TGSGKSTLLE NLIGIKQPQS GKIWINDISL 
EPQTLPEVRR YIGFGFQDAN DQLFMPTILE DITFGPLNYG VPAPIARDQA RHLLADFGLE
AYANRSAHEL SGGQRRLAAL AAILALEPAI LILDEPTTGL DPAWRRHLAR VLLNLPVQVM
LIASHELHWL GKVTQRALVL SNGRIQVDNE IQPLLQNGEI LEQLGLPIDW