Gene Ava_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1743 
Symbol 
ID3682125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2175467 
End bp2176204 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content40% 
IMG OID637717083 
Producthypothetical protein 
Protein accessionYP_322260 
Protein GI75907964 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.311817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTA TGTTAAACTA CAACCCGTTA CACTGTTTAC CATCGTCTGA AGAGTTACCC 
GATTCTGATG ATACGCCTGT GGATAATGAA CTACAAGATT TAATTCCTAG CTTGTTAAAG
TCAACACTAG CTTTAGTGTG GTCAGATCGT TGGGATTGGT ACTTTGGTGT AAATATGGGC
ATATACTATG ACCCTAAAAA ATCTGCCATT GTACCAGATG GTTTTCTCAG CATAGAGGTT
AAGCGTTTTA TTGATGGGGA CTTACGCCTG AGTTATGTAT TGTGGGAAGA ACAAAAGCCA
CCTGTTTTAG TGGTGGAGGT TGCTTCCCCG AAACATTTAG GAGAATATAG CAGCAAAAAA
GAACTCTATG CAAAAGAATT AGGAATTTTG TACTACGTTG TGTACAACCC TTTTCGACGC
AAGAAATCTC CTCTGGAAGT GTATCGGTTA GAAGATGGGG AATATATCCT CATGTCAGGA
GATCCAATTT GGCTACCAGA AATTGGTTTA GGAATTGGAA GAGAACGTGG CATTTATCAA
GGTATAGCGC GGGAGTGGTT GTATTGGTAT AACGAAAAAG GGGAAAGGTT GCTTACCCCA
GAGGAACGTA TTTTGGATGC AGAACAACGG GCAAATTTTG AATCACAACG ACGTTTAGAA
GCAGAAGAAC AAGTCCATAT TTTGACAGAA AGATTAAAAA CCTTGGGTTT TGAGCCAGAA
ACAATGGCTG GAAATTAA
 
Protein sequence
MRLMLNYNPL HCLPSSEELP DSDDTPVDNE LQDLIPSLLK STLALVWSDR WDWYFGVNMG 
IYYDPKKSAI VPDGFLSIEV KRFIDGDLRL SYVLWEEQKP PVLVVEVASP KHLGEYSSKK
ELYAKELGIL YYVVYNPFRR KKSPLEVYRL EDGEYILMSG DPIWLPEIGL GIGRERGIYQ
GIAREWLYWY NEKGERLLTP EERILDAEQR ANFESQRRLE AEEQVHILTE RLKTLGFEPE
TMAGN