Gene Ava_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1739 
Symbol 
ID3682121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2172002 
End bp2173981 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content32% 
IMG OID637717079 
Producthypothetical protein 
Protein accessionYP_322256 
Protein GI75907960 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.408592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT CAGAAACTAA GTTACAGCAG ATTATTGAAG GAGCAAAACA GTACCTTGTG 
CCTTTATTCC AACGACCTTA CAGTTGGGAC AAAGTTCAGT GGGAAGCATT ATGGAGTGAC
ATTGTCGAAC TATATACGAT GGATGCGCCG CACCCTCACT TCATGGGATC TATTGTGACT
ATGCCAACCC AAGCTGTACC TGAAGGAGTA AGCAAATTCC TGCTGATTGA TGGTCAACAA
CGATTAACAA CAATATTTAT TATCCTCTCA GCTTTGCGAG ATAGAGCTAA GGAATTAGAG
TTAAAACTAG CTGAAGAAAT TAATCAAACT CTTTTAGTAA ATCCTTTTAA AGAAGGATCA
GATTATTACA AATTAGAACT AACTAGGTTA AAGTCAGATC GTGAAGCATT TCATCATATT
ATTAATTCGG AATCACATAT TAGTAGTGGG ATTTCGCAAT GTTATCTTTT CTTTCAAAAA
AAAATTATCC ATAGTGGACT AGAACTTCAA AGAATAAAAA AAGTTATTTG TAGTAAACTT
TCTCTGGTAA GTATTGTACT AGACTTAGAT GATAATCCCT ATCTGGTTTT TGAAAGCTTG
AATGCTAAAG GAATGCCTCT TACACAAGCT GATTTAATTC GTAACTATTT ATTTATGAGA
ATTGATATCA GTAATCAAGA ATCAGTCTAT ACTGATTACT GGAAACCTAT GCAGGAAATA
TTAAAAAATA ATTTAACAGA TTTTATTCGT CACTATCTTA ATAAAAGTGG ATTTGATGTC
AAACAGAGTG AGATTTATTT TGCAACCAAA GAACGAATTA GTAAAAGTGA TTCTCTATCT
TATTTGAAGG ATTTATATAT ATTTGCAGAA TACTATGCTA GGCTCTTAGA ACCTCAACGA
GAACTCAATG AAAATATCAG AAAACATTTA TACCGTCTTA ATCGTTTAGA CATTGCCACT
GTATATCCTT TTCTTCTTAA CTGCTACGAT GATTGGGTTC AATCTAAAAT TACCGAAGAA
GAGTTTATTT CAATTTTAAA AATTATTGAA AATTTTTTGA TACGACGTTT TATATGTAAT
GTTCAAACAA GAGGATTAAA TAGAATATTT GCATTACTTT ACTCAGAGGT TAGCAAAAGA
TCGAGTTTGG CTTCTGATGA TTTTATCAAG CGTTTGAAAT TAAGTCTTCA GAGCCGTAAT
TATCCGAAAG ACGCAGAGTT TAAAGCTAGG TTAATTGATG TAAAGCTATA TGGAGGTAAT
CGCTCTGAAA AGACAAAGCT TATTCTTGAA TCAATTGAGG AATCTTTTAA ACATAAGGAA
AAAGTGTCTT TCGATGAACT TTCTATTGAA CATATTATGC CACAAACTCT TAATGAATGG
TGGCAAAAAA GTTTAGGAGA AGATTGGGCT ATAACTCATG AATTATATTT GCATTCTTTA
GGAAATCTCA CACTTACTGC ATATAATCCT GAACTTTCCA ATAATGATTT TCTATACAAA
AAAACTCACT ATAAGAATAG CCATTTAGAG TTAAATAAAT ATTTTCACCA TAAAGAATTT
TGGCGAAGAG AGGATATTGA AGCACGAGCA GAATATCTTG CTGAACGCGC TTTACAAATT
TGGGATTATT TTGGCGAAGA GGAAGTAAAT CCGTCGGAAT CTAGTATTTT GACTGGTACT
ACTCCCAAAT TACTGCATAT ATTTGGTCAA GAATATTCCG TTAAAAGCTG GCGGGATGTT
TTAGAAACGA CTTTAAATAC ACTTTCTGAT TTAGAGCCTG AGAAATTTAA AGAGATAATG
CAGCAATTTC CTAGATTTAT AGGAATTGAT GAAAAAGATT TTCGTAGTAC CCGCAAACTT
AAAAATGGAG TTTTTATTGA AGTTAATTTA TCAGCTAAAG ATATTGGTGC TTTCTGTAGG
AAAGCAATAG AAACAACAGA GTTATCAAGT GAGGAATGGT ATGTTGAAAC GGTCACTTAG
 
Protein sequence
MKASETKLQQ IIEGAKQYLV PLFQRPYSWD KVQWEALWSD IVELYTMDAP HPHFMGSIVT 
MPTQAVPEGV SKFLLIDGQQ RLTTIFIILS ALRDRAKELE LKLAEEINQT LLVNPFKEGS
DYYKLELTRL KSDREAFHHI INSESHISSG ISQCYLFFQK KIIHSGLELQ RIKKVICSKL
SLVSIVLDLD DNPYLVFESL NAKGMPLTQA DLIRNYLFMR IDISNQESVY TDYWKPMQEI
LKNNLTDFIR HYLNKSGFDV KQSEIYFATK ERISKSDSLS YLKDLYIFAE YYARLLEPQR
ELNENIRKHL YRLNRLDIAT VYPFLLNCYD DWVQSKITEE EFISILKIIE NFLIRRFICN
VQTRGLNRIF ALLYSEVSKR SSLASDDFIK RLKLSLQSRN YPKDAEFKAR LIDVKLYGGN
RSEKTKLILE SIEESFKHKE KVSFDELSIE HIMPQTLNEW WQKSLGEDWA ITHELYLHSL
GNLTLTAYNP ELSNNDFLYK KTHYKNSHLE LNKYFHHKEF WRREDIEARA EYLAERALQI
WDYFGEEEVN PSESSILTGT TPKLLHIFGQ EYSVKSWRDV LETTLNTLSD LEPEKFKEIM
QQFPRFIGID EKDFRSTRKL KNGVFIEVNL SAKDIGAFCR KAIETTELSS EEWYVETVT