Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1731 |
Symbol | |
ID | 3682152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2166340 |
End bp | 2167011 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717071 |
Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
Protein accession | YP_322248 |
Protein GI | 75907952 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTA CTACCCGTAA ATCACCTTCT AAAAAGCAAC GGGCGTTAGA AGTTCTCTCT CGCCTGAAGC GTCTTTATCC CGATGCCACC TGCTCCTTAA ATTACACCAC AACAGTACAG TTGCTGGTGG CAACTATTCT CTCAGCCCAG TGTACGGATG AGCGAGTCAA TCTAGTTACA CCAGCTTTAT TTAGCCGCTT TCCTGATGCG CCTAGTCTAG CGAATGCGGA TTTAACAGAG TTAGAAAACT TGGTACGTTC CACAGGGTTT TATCGCAATA AAGCCAAAAA TATTCAAGCC GCCTGTCGCA TGATTGTTAG TGAGTATAAC TCTGTGGTTC CCAACACAAT GGAACAGTTG CTTAAACTGC CTGGTGTGGC GAGAAAAACG GCAAATGTGG TTTTAGCTCA TGCCTATGGT ATCAATGCTG GGGTGACAGT AGATACCCAT GTGAAGCGCC TCAGCCAACG CTTAGGTTTA ACTAAATATC CAGACCCCGT TCACATTGAA CAGGATTTAA TGAAATTACT GCCCCAACCA GATTGGGAAA ATTGGTCAAT TCGGCTAATT TATCACGGTC GCGCTGTCTG TAAAGCCCGT TCTCCTGTAT GTGAGGCTTG CGAATTGGCG GATTTATGTC CGTCTGTCAC GAAAACAATT ATTGTTGGGT AG
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Protein sequence | MSTTTRKSPS KKQRALEVLS RLKRLYPDAT CSLNYTTTVQ LLVATILSAQ CTDERVNLVT PALFSRFPDA PSLANADLTE LENLVRSTGF YRNKAKNIQA ACRMIVSEYN SVVPNTMEQL LKLPGVARKT ANVVLAHAYG INAGVTVDTH VKRLSQRLGL TKYPDPVHIE QDLMKLLPQP DWENWSIRLI YHGRAVCKAR SPVCEACELA DLCPSVTKTI IVG
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