Gene Ava_1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1731 
Symbol 
ID3682152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2166340 
End bp2167011 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID637717071 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_322248 
Protein GI75907952 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACTA CTACCCGTAA ATCACCTTCT AAAAAGCAAC GGGCGTTAGA AGTTCTCTCT 
CGCCTGAAGC GTCTTTATCC CGATGCCACC TGCTCCTTAA ATTACACCAC AACAGTACAG
TTGCTGGTGG CAACTATTCT CTCAGCCCAG TGTACGGATG AGCGAGTCAA TCTAGTTACA
CCAGCTTTAT TTAGCCGCTT TCCTGATGCG CCTAGTCTAG CGAATGCGGA TTTAACAGAG
TTAGAAAACT TGGTACGTTC CACAGGGTTT TATCGCAATA AAGCCAAAAA TATTCAAGCC
GCCTGTCGCA TGATTGTTAG TGAGTATAAC TCTGTGGTTC CCAACACAAT GGAACAGTTG
CTTAAACTGC CTGGTGTGGC GAGAAAAACG GCAAATGTGG TTTTAGCTCA TGCCTATGGT
ATCAATGCTG GGGTGACAGT AGATACCCAT GTGAAGCGCC TCAGCCAACG CTTAGGTTTA
ACTAAATATC CAGACCCCGT TCACATTGAA CAGGATTTAA TGAAATTACT GCCCCAACCA
GATTGGGAAA ATTGGTCAAT TCGGCTAATT TATCACGGTC GCGCTGTCTG TAAAGCCCGT
TCTCCTGTAT GTGAGGCTTG CGAATTGGCG GATTTATGTC CGTCTGTCAC GAAAACAATT
ATTGTTGGGT AG
 
Protein sequence
MSTTTRKSPS KKQRALEVLS RLKRLYPDAT CSLNYTTTVQ LLVATILSAQ CTDERVNLVT 
PALFSRFPDA PSLANADLTE LENLVRSTGF YRNKAKNIQA ACRMIVSEYN SVVPNTMEQL
LKLPGVARKT ANVVLAHAYG INAGVTVDTH VKRLSQRLGL TKYPDPVHIE QDLMKLLPQP
DWENWSIRLI YHGRAVCKAR SPVCEACELA DLCPSVTKTI IVG