| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1719 |
|---|
| Symbol | |
|---|
| ID | 3682140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2157184 |
|---|
| End bp | 2158548 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637717059 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_322236 |
|---|
| Protein GI | 75907940 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATAT CTGCCAGTTC AGATTTTGTG GCTCTATGTC GAGAGCAAAT AGCACTACTT
ACCCAAGGGC TAGGAGCTTC TTTAAGTGTA GTTTATCTAA CCCAAGAATT GATAGAGTCG
CCGACAGGGG AGGCGAAACT GATTCCTGTG GTTGCTTATC CAGAGACAGC AGTTATACTG
CCAGGAGAAG AGATTGCTGA GGTGAATGCA CGTAAACAAT TACAAGTGGG TGATATGCTG
TTGCTACCTC AACAACAGGG GAAATTATTG GCTGTAGCGC CAGCCGAAGA AACACCAGAG
TCGGGGAGAG CGCCTACAGT AGGTGGAACG TCATCGCCTT TTGGTGATGA TTACTTGTTA
GATAAACGCC AAATAGTCTT ACCTCTGGTG CATGAGGGGG TGATGATGGG ATTATTGGTG
ACAAGTAGAG ACGATCGCCC CTGGAACGAA CAAGAGCAAA GCCAAGTGCA GAAAGTCGGA
CAAACACTGG CGATCGCTTG TATTTTGGAT CAGCGTCGAG CATGGTTGCA ACACCAACTG
CATCAACAAC AAATTCTGCA AGAACAACAG CAAGATTTAC TCGATAATTT ATTACATCAG
TTTCGGAATC CCTTAACTGC CTTACGGACT TTTGGTAAAC TTCTCTTGAA AAGATTGCGC
CCTGGTGATC CAAATCGAGA TGTGGGCGAG AATATTGTTA GGGAGAGCGA TCGCCTCAAG
GAATTGCTAC AAAAATTTGA GCAAGTCATT GATTGGACAG AGGCAGATTT ATCTAGGTTA
GTTTTACCAG AAAAAGAGGG ATTTGTCGAA GCCACCGTCC AAAAAGAAGC CAAACCAGCG
TTATTATTAC CGGGGACGGG AGAGCAATTA ACTGATTGTG CTGTAATTGA TTTATTAACA
CCATTACTCA TGTCAGCCAA AGCGATCGCT CAAGACCGAC ATATCAAGTT GAAAGCAGAT
ATTTCTCAAG ATTTACCATT AGTCAGGGTA AATATTAAAG CTTTGCAAGA AGTGTTGACT
AATATCATTG ATAATGCCTT AAAATACACA CCCCAAGGTG GCAAGATTTA TATTCAAGCC
GGGCAAGAAA AACTGAATTT TCAAGGAATT GCCATTAGTG ATAATGGCCC TGGTATTCCT
CAAGAAGATT TAGCCCATTT AGGTGAAAGA CATTACCGAG GTGTACAAGC CCAAACAGAA
ATTCCTGGTA CAGGCTTAGG ATTGGCGATC GCTAAACAAT TAATTGAGCA AATGCAGGGC
GAAATTGAAA TTTTCAGCCC GGCAATTAAC TCCAAATTAA CTTCACCTAA TACACCAGGA
ACAACGTTTA TTATTTGGTT ACCGATGAGT CAAAGTAATT CGTAA
|
|---|
| Protein sequence | MLISASSDFV ALCREQIALL TQGLGASLSV VYLTQELIES PTGEAKLIPV VAYPETAVIL
PGEEIAEVNA RKQLQVGDML LLPQQQGKLL AVAPAEETPE SGRAPTVGGT SSPFGDDYLL
DKRQIVLPLV HEGVMMGLLV TSRDDRPWNE QEQSQVQKVG QTLAIACILD QRRAWLQHQL
HQQQILQEQQ QDLLDNLLHQ FRNPLTALRT FGKLLLKRLR PGDPNRDVGE NIVRESDRLK
ELLQKFEQVI DWTEADLSRL VLPEKEGFVE ATVQKEAKPA LLLPGTGEQL TDCAVIDLLT
PLLMSAKAIA QDRHIKLKAD ISQDLPLVRV NIKALQEVLT NIIDNALKYT PQGGKIYIQA
GQEKLNFQGI AISDNGPGIP QEDLAHLGER HYRGVQAQTE IPGTGLGLAI AKQLIEQMQG
EIEIFSPAIN SKLTSPNTPG TTFIIWLPMS QSNS
|
|---|
| |