Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1718 |
Symbol | |
ID | 3682139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2155891 |
End bp | 2157135 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717058 |
Product | S-layer region-like |
Protein accession | YP_322235 |
Protein GI | 75907939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATT TAACTCGTTG GCAATCTGGC ACATCTGCAC TCATGGCTTT GAGCATCACA GCAGGAACTG TTGCACCTTT TTTAGTAGCA TCTCCATCTT TCGCTCAAAC TACTTTTTCT GATGTTTCCT CGAACTACTG GGCTGCACAG TTTATTCAAC AATTGTCCCA GCGAGGCATT ATTGCTGGCT TCCCTGATGG TTCATTCCGT CCAGAAGAAC CAGTAACTCG CGCTCAATTT GCGGCGATGG TCAATAAAGC TTTTCAAAAA GCACCAGAAC GGCAGGCAAT TAATTTTGTT GATGTCCCCA GCAACTATTG GGCATCTAGC GCCATTCGGC AAGCCTATAC CATTGGTTTC CTCTCAGGAT ACCCAGGCAA TCGTTTTGAG CCTAACCAAG CTATTCCCCG CCAGCAGGTT TTGGTTTCCC TCGCCAACGG TCTGGAATAT ATTCCCAGTG GTAACGTTGA AAGTACTCTG CAATACTTTA ACGATGCTGT TAACGTTGCT GGCTATGCTC GTAGCCCCAT AGCCGCCGCC ACTGAGCAAA AAATCGTGGT GAATTATCCC AACGTCAACT TTTTAAATCC CACAGCAACA GCTACAAGGG CGCAAGTAGC AGCTTTTATC TACCAAGCGT TAGTTAGTTC TAATCAAGCC TCAGCAATCA CCTCGCCCTA TATTGTGGCT ACTCAAGCTA ATACTCCCAG AATACCTACT TCTGCGACCA TTCCTCAAGG GACTGTGATT TCAGTGAAGT ACGACAAGGC AGAGAAAATT CTCGTAACAA AGGATGAAAC TGCACCTTTG ACCCTTACCG TAGACGAAAA CGTAGTTACT CAAGCCGGTA CTGTGGTAAT TCCGGCTGGT AGCCAGGTAG TCGGGGAACT GAAACCGGCT CAAGGCGGTT CCCAATTCGT GGCTCAAAAA CTCGTTTTAA CTACAGGTCA AGAGTATCAA CTGAATGCAA CCTCAGAAGT CATTAACAAA ACCGAAACTG TCAGAAAGGG TGCTAGCACA GGCACAATTA TTAAGAATAC CGTCCTTGGT GCAGGTGCCG CCGCCGCCGT TTCTGCTGTC ACAGGCGATC GCGCGATCGC TACCGAAGAA GTTTTAGGCG GTGCTGCAAT TGGCGGATTA ATAGGCTTGT TTTTCGGCAG AAATAGTGTT GACTTAATCG CTATCGACCC AGACACCGAT TTACAAATGA CCATTAACCA AAGCCTACTG GTTTCATTGA GATAG
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Protein sequence | MFNLTRWQSG TSALMALSIT AGTVAPFLVA SPSFAQTTFS DVSSNYWAAQ FIQQLSQRGI IAGFPDGSFR PEEPVTRAQF AAMVNKAFQK APERQAINFV DVPSNYWASS AIRQAYTIGF LSGYPGNRFE PNQAIPRQQV LVSLANGLEY IPSGNVESTL QYFNDAVNVA GYARSPIAAA TEQKIVVNYP NVNFLNPTAT ATRAQVAAFI YQALVSSNQA SAITSPYIVA TQANTPRIPT SATIPQGTVI SVKYDKAEKI LVTKDETAPL TLTVDENVVT QAGTVVIPAG SQVVGELKPA QGGSQFVAQK LVLTTGQEYQ LNATSEVINK TETVRKGAST GTIIKNTVLG AGAAAAVSAV TGDRAIATEE VLGGAAIGGL IGLFFGRNSV DLIAIDPDTD LQMTINQSLL VSLR
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