Gene Ava_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1718 
Symbol 
ID3682139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2155891 
End bp2157135 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID637717058 
ProductS-layer region-like 
Protein accessionYP_322235 
Protein GI75907939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATT TAACTCGTTG GCAATCTGGC ACATCTGCAC TCATGGCTTT GAGCATCACA 
GCAGGAACTG TTGCACCTTT TTTAGTAGCA TCTCCATCTT TCGCTCAAAC TACTTTTTCT
GATGTTTCCT CGAACTACTG GGCTGCACAG TTTATTCAAC AATTGTCCCA GCGAGGCATT
ATTGCTGGCT TCCCTGATGG TTCATTCCGT CCAGAAGAAC CAGTAACTCG CGCTCAATTT
GCGGCGATGG TCAATAAAGC TTTTCAAAAA GCACCAGAAC GGCAGGCAAT TAATTTTGTT
GATGTCCCCA GCAACTATTG GGCATCTAGC GCCATTCGGC AAGCCTATAC CATTGGTTTC
CTCTCAGGAT ACCCAGGCAA TCGTTTTGAG CCTAACCAAG CTATTCCCCG CCAGCAGGTT
TTGGTTTCCC TCGCCAACGG TCTGGAATAT ATTCCCAGTG GTAACGTTGA AAGTACTCTG
CAATACTTTA ACGATGCTGT TAACGTTGCT GGCTATGCTC GTAGCCCCAT AGCCGCCGCC
ACTGAGCAAA AAATCGTGGT GAATTATCCC AACGTCAACT TTTTAAATCC CACAGCAACA
GCTACAAGGG CGCAAGTAGC AGCTTTTATC TACCAAGCGT TAGTTAGTTC TAATCAAGCC
TCAGCAATCA CCTCGCCCTA TATTGTGGCT ACTCAAGCTA ATACTCCCAG AATACCTACT
TCTGCGACCA TTCCTCAAGG GACTGTGATT TCAGTGAAGT ACGACAAGGC AGAGAAAATT
CTCGTAACAA AGGATGAAAC TGCACCTTTG ACCCTTACCG TAGACGAAAA CGTAGTTACT
CAAGCCGGTA CTGTGGTAAT TCCGGCTGGT AGCCAGGTAG TCGGGGAACT GAAACCGGCT
CAAGGCGGTT CCCAATTCGT GGCTCAAAAA CTCGTTTTAA CTACAGGTCA AGAGTATCAA
CTGAATGCAA CCTCAGAAGT CATTAACAAA ACCGAAACTG TCAGAAAGGG TGCTAGCACA
GGCACAATTA TTAAGAATAC CGTCCTTGGT GCAGGTGCCG CCGCCGCCGT TTCTGCTGTC
ACAGGCGATC GCGCGATCGC TACCGAAGAA GTTTTAGGCG GTGCTGCAAT TGGCGGATTA
ATAGGCTTGT TTTTCGGCAG AAATAGTGTT GACTTAATCG CTATCGACCC AGACACCGAT
TTACAAATGA CCATTAACCA AAGCCTACTG GTTTCATTGA GATAG
 
Protein sequence
MFNLTRWQSG TSALMALSIT AGTVAPFLVA SPSFAQTTFS DVSSNYWAAQ FIQQLSQRGI 
IAGFPDGSFR PEEPVTRAQF AAMVNKAFQK APERQAINFV DVPSNYWASS AIRQAYTIGF
LSGYPGNRFE PNQAIPRQQV LVSLANGLEY IPSGNVESTL QYFNDAVNVA GYARSPIAAA
TEQKIVVNYP NVNFLNPTAT ATRAQVAAFI YQALVSSNQA SAITSPYIVA TQANTPRIPT
SATIPQGTVI SVKYDKAEKI LVTKDETAPL TLTVDENVVT QAGTVVIPAG SQVVGELKPA
QGGSQFVAQK LVLTTGQEYQ LNATSEVINK TETVRKGAST GTIIKNTVLG AGAAAAVSAV
TGDRAIATEE VLGGAAIGGL IGLFFGRNSV DLIAIDPDTD LQMTINQSLL VSLR