Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1708 |
Symbol | |
ID | 3682188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2139221 |
End bp | 2141935 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637717048 |
Product | phosphoesterase, RecJ-like |
Protein accession | YP_322225 |
Protein GI | 75907929 |
COG category | [J] Translation, ribosomal structure and biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.833662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAA TTCTTTGCCA CACAACAGCT GATTTTGATA CATTGGGCGC AGCCGTAGGA CTAACTTGCC TATTACCTGG AAGCAAGATT GTGTTGACTG GGGGCGCGCA TCCACCTGTG CGAGATTTTT TGGCGTTACA CCGAGATGAG TATCCTTTAA TTGAAAGGCG TTCGGTAAAT CCTGAGAAAA TTCGATCGCT CACTATAGTA GATGCCCAAC AACGCGATCG CCTGGGTAAG CCTGCTGAGT GGTTAGATTT ACCTCAAGTT CAGAAAATTA CGGTCTACGA CCACCACACG GGACAAACAT CAGATATCCC TGCAACTCAG TTACATATTG CCTCGGTGGG GGCAACTACA ACCCTGATTG CGGAGGAATT ACAACGGCAG CAAATCACTC TCAATCCTGC CCAAGCAACG GTGATGGCTT TGGGTATTCA TGTAGATACG GGTTCCCTTA CCTACGACCA ATCAACTCCC AGGGATGCCT TAGCTTTAGC TTGGTTGATG GTACAGGGTG CTAGTTTATC TGTAATTGCC AATTACCGTG ACCCTGGTTT ATCCCCCCAA TTGCAGCGAC TATTAACGGA AGCGTTGGAA AAATTAGAAT ATCTTTGCTT GCGTGGTTAT ACTATCGCTT GGGTGACTTT AACAACAGAT GGTTATGTCC CTGGGTTGTC AAGTCTAGCC TCACAGCTCA TAGAGTTAAC AGAAATTGAT GCTTTGCTGT TGGCAAATGA ACACCCATCA AATAAAGATG ATTCCCGTTT TACAGTAATT GGGCGATCGC AAATTCCGGG TCTGCATCTA GACCAATTAT TTCAACCCTT GGGCGGTGGT GGTCATTCCC AAGCAGCATC ACTAAATTTA CGTGGTGTTG ATACCCAAGA TATCCTCCAA CAACTGCTCA AAGGTATCAA GGCGGCTATT CCTCATCCCC CCACAGCCAG GGATTTGATG TCTTCCCCTG TCCGCACAAT TCGCCCGGAA ACTACAATTG CCGAAGCACA GCGCATTTTA TTACGCTACG GACACTCTGG TTTATCTGTG GTTAATCCCC AAGGGCAATT GGTGGGGATT ATTTCCCGTC GTGATTTGGA TATCGCCCTA CATCACGGAT TTAGTCATGC GCCAGTTAAA GGTTACATGA CCACTGATTT AAAAACCATC ACCCCAGATA CAACGTTGCC ACAAATTGAG TCGCTGATGG TGACCTATGA TATCGGTCGC TTGCCAGTAT TGGCAAATGA GCAGTTAGTG GGTATCGTCA CTCGTACCGA TGTTCTACGG GAACTGCATC AAAATATTGC TGTAGGTGGT AGCGGGAATT TAAGCCAATT CCGAGACATG GGTACTGAGT TGAAAACTTC CCTCAGCCAT GAATTGCGAT CGCGTCTGAC TCCCCAACTC TGGCAATTAC TCACCACTGC TTCCCAAGCT GCCGAGGAAA GGGGTTGGCA TTTGTATTTA GTTGGTGGTG CGGTGCGGGA CTTGCTGTTG GCAGAAGCAG CCGCCGGCAC GCTCATGATC ACAGATATAG ATTTGGTAGT TGATGGCTTC CACAAATCAG CCGATGTGGG TGCAGGTGTG GAACTAGCAA AGGCACTGCA AGAAATTTAC CCAGCCGCCC GTTTAGAAAT CCACGGTGCT TTTCAAACGG CTGCTTTGTT GTGGCACAAA GACCCAGAAT TAGATTCTTT GTGGGTAGAT ATTGCCACCG CCAGAACCGA ATTTTATCCT TACCCCGCCG CCAATCCCGA AGTTGAAGCC AGTTCCATTC GCCAAGATTT ATATCGCCGT GACTTTACCA TCAACGCCCT CGCCCTGCGC CTCACCTCTC CCCGTGCTGG TGATTTACTC GATTTCTTTG GCGGTTTATT AGACTTAAAA GCCAAGCAAA TCCGCGTCCT ACACGCCAAT AGCTTTATCG AAGACCCCAC CCGGATTTAT CGCGGTGTGC GCTTTGCGGT GCGTTTTGGA TTTGCTATTG AACCACGCAC CGAAGAATAT ATCCGCTATG CCATCAACAG TGGCGTTTAC GATCGCACTG CCCAAAACAA TACCAAAACC CCAGCCCTGC AAACTCGACT CAAAACTGAA CTCAAGCACA TCTTAGAAGC CCCTTACTGG CGATCGGCTT TGCAACTACT CGATGACTTA GGGGCATTGC ACTGCATCCA TCCCACCCTG AGTTTAAATA GTGAACTCAT ACACCAACTA CGTCTACTAG AACGTTGTTT GCGGCGATTT GACCCCCAAC AAAACCTAAT TCCTTGGCAA ATGCGCTTAG AAGCCATTAT TGCCCACCTA GCACCAATGT ATCGGGGTAA AGTCGCCAAA AATCTGCAAT TACAGGAAGA TAGCATTCAG CATTTGCAAA ACCTCGCTGT TGCCCAAGCT GAGATTGTAC AATCTCTATC TGAATATCAG CGCCCCAGCC AAGTAGTTCA GCTACTACGC AAGTATAATT TAGAAATACT AATTTTGATT GCTTTACAAA GCCAGCGCCC CATCAGGCGG CAAATCTGGC AATACTTAAC AGTCTGGGCT AACGTTCAAC CGATTCTAAA CGGTAATGAC CTCAAGAAGT TAGGGTATAA ACCGGGGCCA CAATATCGAC AAATGCTAGA TGATTTACTA GCTAAAACTT TAGATGGAAA TATTACAAAT CAAGTAGAAG CCCAAGAGTT TTTAGCCCAG CAGTATCATA AATAA
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Protein sequence | MDLILCHTTA DFDTLGAAVG LTCLLPGSKI VLTGGAHPPV RDFLALHRDE YPLIERRSVN PEKIRSLTIV DAQQRDRLGK PAEWLDLPQV QKITVYDHHT GQTSDIPATQ LHIASVGATT TLIAEELQRQ QITLNPAQAT VMALGIHVDT GSLTYDQSTP RDALALAWLM VQGASLSVIA NYRDPGLSPQ LQRLLTEALE KLEYLCLRGY TIAWVTLTTD GYVPGLSSLA SQLIELTEID ALLLANEHPS NKDDSRFTVI GRSQIPGLHL DQLFQPLGGG GHSQAASLNL RGVDTQDILQ QLLKGIKAAI PHPPTARDLM SSPVRTIRPE TTIAEAQRIL LRYGHSGLSV VNPQGQLVGI ISRRDLDIAL HHGFSHAPVK GYMTTDLKTI TPDTTLPQIE SLMVTYDIGR LPVLANEQLV GIVTRTDVLR ELHQNIAVGG SGNLSQFRDM GTELKTSLSH ELRSRLTPQL WQLLTTASQA AEERGWHLYL VGGAVRDLLL AEAAAGTLMI TDIDLVVDGF HKSADVGAGV ELAKALQEIY PAARLEIHGA FQTAALLWHK DPELDSLWVD IATARTEFYP YPAANPEVEA SSIRQDLYRR DFTINALALR LTSPRAGDLL DFFGGLLDLK AKQIRVLHAN SFIEDPTRIY RGVRFAVRFG FAIEPRTEEY IRYAINSGVY DRTAQNNTKT PALQTRLKTE LKHILEAPYW RSALQLLDDL GALHCIHPTL SLNSELIHQL RLLERCLRRF DPQQNLIPWQ MRLEAIIAHL APMYRGKVAK NLQLQEDSIQ HLQNLAVAQA EIVQSLSEYQ RPSQVVQLLR KYNLEILILI ALQSQRPIRR QIWQYLTVWA NVQPILNGND LKKLGYKPGP QYRQMLDDLL AKTLDGNITN QVEAQEFLAQ QYHK
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