Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1687 |
Symbol | |
ID | 3682243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2116148 |
End bp | 2116939 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717026 |
Product | hypothetical protein |
Protein accession | YP_322204 |
Protein GI | 75907908 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAT CCAAATCCAG CTTAGGAACA TGGAGTCAGC GATTGCTGGC GGCAATATTT CTGGGTGGAC AAGCTATAGT TCACCTCTTG AGGGGTAAAA TCCACTGGCG CAACACCAGA GAACAAATGG CAGCCGTAGG GCCAGATTCG TTATTTATTG CCCTATTAAC AGCAGTTTTC GTAGGTGCAG TGTTTACCAT TCAGGTAGCA CGGGAGTTCA TTAATTTTGG CGCAGGTAAT CTTGTCGGCG GAGTATTAGC AGTAGCATTG ACGCGGGAAT TATCACCAGT ACTCACAGCC GTGATATTAG CAGGACGTGT GGGTTCTGCC TTTGCCGCAG AAATTGGCAC AATGCGGGTA ACAGAACAAA TCGATGCCAT GTTGATGTTA AAAACTGACC CAATTGACTA TTTAGTCATA CCCCGTCTGC TGGCTTGTTT TCTCATGCTG CCAATTTTAA CCCTCTTGTC CTTAGTCACA GGAATTTTGG GGGGACTAAT CATCGCCACA AATATGTATG GAATCTCCGA CACAGTATTT TTAGATTCCG CCCGTAACCT GCTGGAAGTC TGGGATATTT GTAGCGCCAT GATTAAGGCG TGCTGCTTTG GTGTGTTAAT CGCCATTATT GGCTGTAGTT GGGGTTTGAC AACCACAGGC GGAGCTAAAG GAGTAGGACA ATCAACTACA ACTGCTGTTG TTACGGCCTT ATTAATTATC TTCGTGAGCA ACTTTTTCTT GTCCTGGGTA ATGTTTCAAG GAACTGGTGG TGCATTCCAG CAAGGGTTAT AA
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Protein sequence | MTTSKSSLGT WSQRLLAAIF LGGQAIVHLL RGKIHWRNTR EQMAAVGPDS LFIALLTAVF VGAVFTIQVA REFINFGAGN LVGGVLAVAL TRELSPVLTA VILAGRVGSA FAAEIGTMRV TEQIDAMLML KTDPIDYLVI PRLLACFLML PILTLLSLVT GILGGLIIAT NMYGISDTVF LDSARNLLEV WDICSAMIKA CCFGVLIAII GCSWGLTTTG GAKGVGQSTT TAVVTALLII FVSNFFLSWV MFQGTGGAFQ QGL
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