Gene Ava_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1687 
Symbol 
ID3682243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2116148 
End bp2116939 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637717026 
Producthypothetical protein 
Protein accessionYP_322204 
Protein GI75907908 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CCAAATCCAG CTTAGGAACA TGGAGTCAGC GATTGCTGGC GGCAATATTT 
CTGGGTGGAC AAGCTATAGT TCACCTCTTG AGGGGTAAAA TCCACTGGCG CAACACCAGA
GAACAAATGG CAGCCGTAGG GCCAGATTCG TTATTTATTG CCCTATTAAC AGCAGTTTTC
GTAGGTGCAG TGTTTACCAT TCAGGTAGCA CGGGAGTTCA TTAATTTTGG CGCAGGTAAT
CTTGTCGGCG GAGTATTAGC AGTAGCATTG ACGCGGGAAT TATCACCAGT ACTCACAGCC
GTGATATTAG CAGGACGTGT GGGTTCTGCC TTTGCCGCAG AAATTGGCAC AATGCGGGTA
ACAGAACAAA TCGATGCCAT GTTGATGTTA AAAACTGACC CAATTGACTA TTTAGTCATA
CCCCGTCTGC TGGCTTGTTT TCTCATGCTG CCAATTTTAA CCCTCTTGTC CTTAGTCACA
GGAATTTTGG GGGGACTAAT CATCGCCACA AATATGTATG GAATCTCCGA CACAGTATTT
TTAGATTCCG CCCGTAACCT GCTGGAAGTC TGGGATATTT GTAGCGCCAT GATTAAGGCG
TGCTGCTTTG GTGTGTTAAT CGCCATTATT GGCTGTAGTT GGGGTTTGAC AACCACAGGC
GGAGCTAAAG GAGTAGGACA ATCAACTACA ACTGCTGTTG TTACGGCCTT ATTAATTATC
TTCGTGAGCA ACTTTTTCTT GTCCTGGGTA ATGTTTCAAG GAACTGGTGG TGCATTCCAG
CAAGGGTTAT AA
 
Protein sequence
MTTSKSSLGT WSQRLLAAIF LGGQAIVHLL RGKIHWRNTR EQMAAVGPDS LFIALLTAVF 
VGAVFTIQVA REFINFGAGN LVGGVLAVAL TRELSPVLTA VILAGRVGSA FAAEIGTMRV
TEQIDAMLML KTDPIDYLVI PRLLACFLML PILTLLSLVT GILGGLIIAT NMYGISDTVF
LDSARNLLEV WDICSAMIKA CCFGVLIAII GCSWGLTTTG GAKGVGQSTT TAVVTALLII
FVSNFFLSWV MFQGTGGAFQ QGL