Gene Ava_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1681 
Symbol 
ID3682237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2108287 
End bp2109432 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID637717020 
Producttransaldolase 
Protein accessionYP_322198 
Protein GI75907902 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA ATCATTTATT GGAGATTAAA AATTACGGTC AAAGTATCTG GATGGATAAC 
TTGAACCGTG ACATTATTCA ATCGGGTGAA CTCAAAAATC TAGTTGAAAA TCAAGGGATT
TGTGGGATTA CCTCTAATCC AGCGATTTTT GAAAAGGCGA TCGCCGATAA TGTCATTTAT
GATGCTGATA TCGAAGCTGG TGTGCGTGTG GGATTACCCA CATACAAAAT TTACGAATCC
CTAATTTTTG CAGATATCCG TAACGCCTGT GATATCTTAC GCCCTGTATA TGAAGCCTCG
AATAAATTAG ACGGTTATGT GAGTATCGAA GTACCACCGA CCATTGCCCA TGATACACAA
GCGACAATTA ACGAAGCCCG CCGTTATTAT CAAGAAATTG GGCGGGAAAA TGTGATGATT
AAAATCCCCG GTACTGAAGC CGGGTTACCA GCTGTAGAAC AGGTAATAGC TGAGGGCATT
AACGTTAACG TTACCCTGCT ATTCTCGGTT CAAAGCTATA TCAACACAGC TTGGGCATAT
ATTCGGGGTT TAGAAAAACG CCTAGCCGAG GGTAAGGACA TCAGCCAAAT TGCTTCTGTT
GCTAGCTTCT TCCTCAGTCG CATTGATAGC AACATTGACG GAAAAATTGA TGCCAAACTA
GCCCGTGGCA TTGATGATAT TAGTTTAGAA GCAAAACTGG TGGCTGTAAA AGGTAAAGTA
GCGATCGCCA ATGCCAAAAT TGCTTATCAA GAATACAAAA AAATTATTGA GAGCGATAGA
TGGCAAGCCC TAGCAGCCAA AGGGGCAAAA GTGCAAAGAT TATTATGGGC TAGCACCAGC
ACCAAAGACC CCAACTACAG CGATGTCATG TATGTCGATG AGTTAATTGG CCCCGATACC
GTCAACACCT TACCACCAGC AACAATTACC GCTTGTGCCG ACCATTGTGA AGTCGCTAGC
CGTGTAGAAA CAGGAGTTGC AGAAGCCTAC CAATTGATCG AAAGCCTCAA AGACCCAGAC
ATCAACATCG ATATTAATGC CGTGATGGAC GAATTGTTAA TCGAAGGCAT TAACAAATTT
GTCCAACCCT TCCAGTCCCT TATGAACTCT TTAGAGGGCA AAGTCAAGCT ATTGTCACCA
GTATAG
 
Protein sequence
MATNHLLEIK NYGQSIWMDN LNRDIIQSGE LKNLVENQGI CGITSNPAIF EKAIADNVIY 
DADIEAGVRV GLPTYKIYES LIFADIRNAC DILRPVYEAS NKLDGYVSIE VPPTIAHDTQ
ATINEARRYY QEIGRENVMI KIPGTEAGLP AVEQVIAEGI NVNVTLLFSV QSYINTAWAY
IRGLEKRLAE GKDISQIASV ASFFLSRIDS NIDGKIDAKL ARGIDDISLE AKLVAVKGKV
AIANAKIAYQ EYKKIIESDR WQALAAKGAK VQRLLWASTS TKDPNYSDVM YVDELIGPDT
VNTLPPATIT ACADHCEVAS RVETGVAEAY QLIESLKDPD INIDINAVMD ELLIEGINKF
VQPFQSLMNS LEGKVKLLSP V