Gene Ava_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1674 
Symbol 
ID3682230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2100330 
End bp2101772 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content47% 
IMG OID637717014 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_322192 
Protein GI75907896 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00374915 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTC TATCGGACAC CGTTGCTTTA TCGCGGATGC AGTTTGCATT GACGGCGATT 
TTTCATATGC TATGGCCTGT TCTCACCACT GGGATGGGGA TTTATCTGGT TATTGTTGAA
GGAATGTGGT TAAAAACACG CCATCCTGAT TACTACCACC ATGCCCGTTT CTGGGCCAAG
CTGTATGTGT TGAATTTCGG GATTGGTGTA GCATCTGGCT TACCAATGGA GTTTCAATTT
GGTACGAACT GGGCCCCATT TTCCGAAGCG GTAGGCGACT TTTTTGGCAG TATTTTAGGC
TTTGAGGCTT CGATGGCATT TATGCTAGAA GCCGGATTTC TGGGTATTAT GCTGTTTGGC
TGGGAACGGG TAAACCCAGT GATTCACTAT TTTGCCACGA TTATGGTTGC TTTTGGTGCA
AACCTATCTA CCTTCTGGAT TTTAGCGGCA AACTCTTGGT TGCAGACCCC AGCCGGTGGG
GAAATAGTAA ATGGGAAGTT TGTTGTTGAT GATTACTTTC AGGCAATTTT AAATCCCTTC
ATGGTCAACA GTGTCTCTCA TATGTTTTTG GGAACACTGG AAACTTCTCT GTTTGTGATT
GGGGGAATTA GCGCCTGGTA TATTCTCAAC AACCGTCATC AAGCTTTCTT TGCGCGATCG
CTCAAAATTG TCTTAGCAAC AGCGATCGCT GTCACCCCAT TACAAATCTA TGTCGGACAC
CTCAGCGCTG AACAGGTAGC TGACTATCAG CCTACAAAAC TCGCAGCGAT GGAAGCTAAG
TGGGAAACCT CTCCAGCCGG ACAGCCTGCG CCCTGGAGTG TAGTTGCATT ACCCAATAAT
CAGACTGAGC AAAATGACTG GGAAATCTCA ATTCCCAACG GCTTAGGCTA CATTTTGGAA
TTCAAAAAAA ATCTGTCTAA ACCCGTTCTG GGACTGAAAG AGTGGAAACC TGAAGATCGC
CCCCGGATGG TGGGGTTGAT TTATTACTCC TTCCGCATCA TGAGTGGTAT CGGCTTTTTC
TTGGCTGGCT TGATGGGTAT CAGTGTGATT CAATGGTTGC GGGGTAAACT TTCACCAGAA
GCGATCGCCG GGCAAAAATG GCTACTGCGA ATCTGGATTT TAGCAGCTCC ATTGGGCTAT
ATTGCTGTAG AGTCAGGCTG GATTGTGCGC TGTGTCGGAC GGCAGCCCTG GGTAGTTTAT
GGGAAAATTC GCACAGCAGA TGGCGTTTCC CACCTACCGG CGACTGAGGT TTTAACATCC
TTGCTCATTT TTGCCGGAAT TTATACAGCC CTGTTTATTT GTGCTTTATT CTTTGGTAGT
CGGATTATTC GTCAAGGCCC CAATTTGGAG CTTCCGGTTC CAGGTATTGA CACCAAACCA
GGCGTAGAAA CTACTCCGGC TGAATTTGTT CCCGATCAAC GTCCTGTGGA AGCACAGCAG
TGA
 
Protein sequence
MNFLSDTVAL SRMQFALTAI FHMLWPVLTT GMGIYLVIVE GMWLKTRHPD YYHHARFWAK 
LYVLNFGIGV ASGLPMEFQF GTNWAPFSEA VGDFFGSILG FEASMAFMLE AGFLGIMLFG
WERVNPVIHY FATIMVAFGA NLSTFWILAA NSWLQTPAGG EIVNGKFVVD DYFQAILNPF
MVNSVSHMFL GTLETSLFVI GGISAWYILN NRHQAFFARS LKIVLATAIA VTPLQIYVGH
LSAEQVADYQ PTKLAAMEAK WETSPAGQPA PWSVVALPNN QTEQNDWEIS IPNGLGYILE
FKKNLSKPVL GLKEWKPEDR PRMVGLIYYS FRIMSGIGFF LAGLMGISVI QWLRGKLSPE
AIAGQKWLLR IWILAAPLGY IAVESGWIVR CVGRQPWVVY GKIRTADGVS HLPATEVLTS
LLIFAGIYTA LFICALFFGS RIIRQGPNLE LPVPGIDTKP GVETTPAEFV PDQRPVEAQQ