| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1663 |
|---|
| Symbol | |
|---|
| ID | 3682219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2086734 |
|---|
| End bp | 2088389 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637717003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322181 |
|---|
| Protein GI | 75907885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0778534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.136849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC AACGCTCATT TTCTGGTTTT ATTATTGCTG GGGCGATCGC TTTGATTGTA
GCGGCGATCG CAGGCTTTTA CTGGTTCTTT GCTAAAAGTC CGGTTAATAT TGTCGCGTCT
AATTCTCAAC CTAATGCAGC CGTATTTATA TCGAAGCTCG CTCCTGTAAC AGTTTCATTG
CTGGCGAACC CTGATAAGTT ACAATCTTTC GACAGTTCAG GCGAAATATC TAAGCTCAAA
ACTAGCTTAT TGGCTAAGAG TGGCATAGAT TACAAACAAG ACATTCAACC TTGGCTAAAA
GATGAAATTA CATTGGCTGT CACTACCCTA GATATTGACC GTGACCCGGA GAACGGTAGA
CAGCCAGGCT ATCTGATGGC GCTAGCCACT AGCAAACCAG AGAAAAGCCA GGAATTTCTG
CAATTATTGT TTTCCAAACG GGTGTTAGCC GGAGCGAACT TAGCAACGGA AGAATATCAA
GGCGCAAAGG TTATCTATGA CAGTTCGCTA CCAGAGTCCG ACTCTCTGGC TGGTGCAGTA
ATTGATAACT TTGTGTTATT CGCTAACAAT CCTAAAGTAT TGCGTGATGC TATTAATAAT
GTCCAGGCTC CAGACTTAAA TTTACTGAGT TCTTCCCAAT ACCAAAAATC TATCAAACAA
ATACCTAAGG GTTCTTTAGC CACGGCTTTT CTCAATCTCC CTCTAGTGGC ACAATGGCAA
GGGTTAGATT TACCAGAACC AACCTACGAT AGCGAAATCG TCGCTTTCAT TTTAAATCCT
CAGGGAATCT TGGCAGAAAC CAGCTTCTTC ACTTCATCAG AAATTGTGCC AACATCACCC
CCATTATCTA AACCTGTAGG CGCATTACGA TATATTCCCG CATCAGCAGG GCTGGTCATT
TCTGGTTCCC ACTTAGATAA CTTGGGTGAC GGCGATTTAG CCAAACTCTG GACACAAGCA
AAAACCGCTA TCTCTGGTTC CGGAACAGAT ATAATTTCCC GACTGGTGCA ACCATTAACT
GATGTGCAGA AAAGTCGGGG TATCAATTTA AGACAAGATA TATTTAGCTG GGTACAGGGA
GAATACGCCG TTGCACTAAT CCCCCGTGCT GGACAAAGCA TTCCTGACTG GGTTTTTGTG
ACAGAAAAGT CAGAAAATGT ACCAGAAGCT ATTGGGCGTT TAGATGCGAT CGCCTCATCT
CAAGGACTCA GTACTAATAC AATTCAACTG GACAAGCAAA CAGTCGTCGC CTGGACAGAA
TTAACCACTG CAACTCAAAA AGCTGATGGC AAAAACAAAC CATCATTTAC AGTAGAAGCC
AAGGTAAAAG GGGTACATAC AACCTTAGGC AATTATGAAA TTTTCACCTC TGACCTAGCA
ACCATTTATG AGGTTTTTAC GGACAAGGAC AAATCTTTAA TCAATAATCG CAACTTCCAA
GATAGTATCG CTACCATTCC CCAACCAAAT CAAGGTTATG TCTATCTGGA CTGGTCAAAA
AGTCAAAACT TAGTAGAGCA GCAAATACCC ATACTTAAGC TCATAGAATT AGTAGGAAAA
CCATTCTTTG AGAATTTGCG ATCGCTCACC TTCAGTAGTT ACGGTAATGA GCCTGGAACG
CTTAAAGGCA GTATTTTATT CCAAATTGAT CATTGA
|
|---|
| Protein sequence | MNTQRSFSGF IIAGAIALIV AAIAGFYWFF AKSPVNIVAS NSQPNAAVFI SKLAPVTVSL
LANPDKLQSF DSSGEISKLK TSLLAKSGID YKQDIQPWLK DEITLAVTTL DIDRDPENGR
QPGYLMALAT SKPEKSQEFL QLLFSKRVLA GANLATEEYQ GAKVIYDSSL PESDSLAGAV
IDNFVLFANN PKVLRDAINN VQAPDLNLLS SSQYQKSIKQ IPKGSLATAF LNLPLVAQWQ
GLDLPEPTYD SEIVAFILNP QGILAETSFF TSSEIVPTSP PLSKPVGALR YIPASAGLVI
SGSHLDNLGD GDLAKLWTQA KTAISGSGTD IISRLVQPLT DVQKSRGINL RQDIFSWVQG
EYAVALIPRA GQSIPDWVFV TEKSENVPEA IGRLDAIASS QGLSTNTIQL DKQTVVAWTE
LTTATQKADG KNKPSFTVEA KVKGVHTTLG NYEIFTSDLA TIYEVFTDKD KSLINNRNFQ
DSIATIPQPN QGYVYLDWSK SQNLVEQQIP ILKLIELVGK PFFENLRSLT FSSYGNEPGT
LKGSILFQID H
|
|---|
| |