Gene Ava_1651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1651 
Symbol 
ID3681993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2074060 
End bp2075043 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content43% 
IMG OID637716991 
Productglycine cleavage T protein (aminomethyl transferase) 
Protein accessionYP_322169 
Protein GI75907873 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.411538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAT CTGCAATAGA CGGTAAAGAC ACAGCCGCTA TCCAAGCCGC AACAGCAGAA 
GTTGCTGTAT ATGATCGCTC CACTTGGGGA CTTATCCGTG TTTCTGATGA TGACCGTTTG
CGGTTTTTAC ACAATCAAAG TACTAATGAT TTCCAGAGTC TAAAGCCAGG ACAGGGCTGT
GATACGGTGA TGGTGACATC TACAGCCCGT ACTATAGATT TGGTGAGTAG TTATGTTCTT
GATGATGCAG TCATACTTTT AGTTTCCCCT AGTCGTCGGG AGTTTTTGCT ACAATGGCTA
GATCGCTATA TCTTTTTTGC TGATAAGGTA CAGTTAACTG ATATTACTGA GGAAACTGCC
ACTTTTAGTA TTATTGGGCC GGGTAGTGAT GCTGTAGTGG AAAAATTGGG TGCGGGAGGA
ATTATCGGTC AACCCCAAGG TAATCATATT ACTATCGATG GCGGTGCGAT CGTTGCGGTG
GGTAGTGGCT TGGCTTCTCC TGGATATACG TTGATTTTGC CAGTGTCCCA AAAACAGCAA
GTATGGCAGC AAATTATCGA TTCAGGGGCG GTAGAATTGA GCGATCGCGC TTGGGATACT
TTACGCATAT TACAAGGAAG ACCAGCACCA GACTCAGAAT TGACGGACGA TTATAATCCT
TTGGAAGTGG GTTTATGGCA GACTATTTCT TTTAACAAGG GTTGCTATAT CGGGCAAGAA
ACCATCGCCA GATTAAATAC ATATAAAGGT GTCAAACAAT ATCTTTGGGG TATTCGTCTT
AACGCTCCAA CAGAAATTGG AGATACTATT ACTATTGGTG ATGAGAAAGT TGGTAAACTC
ACCAGTTATA CAGAAACTCC TGATGGTTAT TTTGGACTAG GTTACATTCG TAGTAAAGCT
GGTGGTGTGG GCTTAAAAGT CCAGGTAGGA AACAGCGAGG GAGAAGTAAT TGCTATCCCC
TTTGTTTCTC ATGAATACCC ATAA
 
Protein sequence
MPTSAIDGKD TAAIQAATAE VAVYDRSTWG LIRVSDDDRL RFLHNQSTND FQSLKPGQGC 
DTVMVTSTAR TIDLVSSYVL DDAVILLVSP SRREFLLQWL DRYIFFADKV QLTDITEETA
TFSIIGPGSD AVVEKLGAGG IIGQPQGNHI TIDGGAIVAV GSGLASPGYT LILPVSQKQQ
VWQQIIDSGA VELSDRAWDT LRILQGRPAP DSELTDDYNP LEVGLWQTIS FNKGCYIGQE
TIARLNTYKG VKQYLWGIRL NAPTEIGDTI TIGDEKVGKL TSYTETPDGY FGLGYIRSKA
GGVGLKVQVG NSEGEVIAIP FVSHEYP