Gene Ava_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1649 
Symbol 
ID3681991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2071258 
End bp2073066 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content48% 
IMG OID637716989 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_322167 
Protein GI75907871 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.443768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG TCTCTACCCT GGTTGAACTG CTACGCGCTC GTGCTACTCA TGAGCCGGAC 
AACCTCGCCT ATATGTTTCT CATTGACGGG AAAACAGAAG GCCCAAAGTT AACATACGCA
GAATTGGATC ATCTAGCCCG TGCCATTGGT GCATTATTGC AGAAACACAA TGCTAAAGGT
GAGCGTGTTT TGCTGCTCTA CCCCCAGGGA TTAGACGTAA TGGCAGCATT TTTGGGCAGT
CTTTATGGTG GAGTCATCGC CATCCCAGCA CCCCCTCCTG ATGCTGGTAG ATTGAAACGG
GCTTTGCCTC GGTTACGGGC AATTGTTAAG GATGCCAACG CTAAATTTGT CTTCACCAAC
CACCACCTTT TGAGTGTTCT GCAAGCAGCC AAGTTGGACT TTCCCGAATT TGAAGAGATG
ACTTGGTTTG CCAGTGAAGA TATTGATTTA GAACTAGCAG ACCAATGGCA AGACCCGCAA
ATTACCCCAG ATACCCTGGC ATATTTGCAA TACACATCAG GCTCGACTTC CACACCAAAG
GGTGTGATGA TTAGCCACCA CAACATTATG CACCACTGCG CTTATCTACA AAAAGCCTGT
GGTTATGATG CTGAAAGTGT TTCCATCACC TGGATGCCAT ATTTCCACGA TTATGGGCTA
GTAGAAGGTT TGACCGTACC CATTTACAAC GGACATCCTT GCTATGTCAT GTCCCCAATG
GCATTTATCA AACAGCCTGT ACGCTGGCTA CAAGCGATTT CTCGCTATCG CGGTACTCAT
AGTCAGGCTC CTAACTTTGC TTATGAACAG TGTGTTCGTC GCGTCACCGA TGCACAACTA
GCTACCTTAA ATCTCAGTAG TTGGGTAGCA GCAGGAAACG CCGCCGAACC GATTAACCCT
AGAGTTTTAG AAGAGTTTTT TGAGAAGTTT GCCCCCAGTG GGTTCAAGTG GGAAACCTTT
GCACCCGCTT ATGGATTGGC AGAAAATACA CTGTTGGTTT CTACCAGCCC TAGAAATACA
CCACCTGTTC TGTGTTTGGT AGAAAAAACC AAAATTGAGC AGAACAAAAT TGTGGAAGCC
ACTACCTGGG ACGATGGAGT CCGGGCTATC CCTGGATGCG GTCGCCTAGT TTGTGAGACG
CAAGTCGCTA TAGTCAACCC AGATACCTTA ACTCGTTGCG CGGCGGATGA AGTCGGCGAG
GTATGGGTAG CAGACCCCAG TGTAGCGGGT GGTTATTGGC AACGCCCCCA GGAAAGTGAA
AGTACCTTCC GTGCCAAGAT TACCGGAAAT AATGAAGTCT CCTTCCTCCG CACAGGTGAC
TTGGGCTTTA TCAAGGGTGG TGAATTGTTC ATCACTGGAC GCATCAAAGA CTTAATCATT
ATCCGGGGGA CTAATCATTA TCCCCAAGAC TTGGAATGGA CTGTACAGGA AATTCACCCA
GCCCTACGCC CAGACTACGG TGCAGCTTTT TCCATCGATG TGGATGGTGT CGAACAACTG
GTGATTGTAC AGGAAGTCAA ACGCAAACCA GAAGAAGAGT TTAACACAGA TGAGGTATTG
ACTAATATTC GGCAAGCGAT CGCCGAAATC CACGAGCTAC AAGCATATGC TGTGGTTCTT
GTCAAGCCTG GAAATGTCCT CAAAACCTCC AGTGGCAAAA TTCAACGACG CGCTTGCAAA
GCCAGTTTCC TCGCCGGTGA GTTGGAAGTT TTAGCCGATT GGAGCGAAAA CCCCAAATAC
ACCGCCAGCT ATCGGCGACT ACAAGGGGAG GTAGACTCTT TGCTGGAAAA GGTGCAAGTT
ACTCACTAA
 
Protein sequence
MTNVSTLVEL LRARATHEPD NLAYMFLIDG KTEGPKLTYA ELDHLARAIG ALLQKHNAKG 
ERVLLLYPQG LDVMAAFLGS LYGGVIAIPA PPPDAGRLKR ALPRLRAIVK DANAKFVFTN
HHLLSVLQAA KLDFPEFEEM TWFASEDIDL ELADQWQDPQ ITPDTLAYLQ YTSGSTSTPK
GVMISHHNIM HHCAYLQKAC GYDAESVSIT WMPYFHDYGL VEGLTVPIYN GHPCYVMSPM
AFIKQPVRWL QAISRYRGTH SQAPNFAYEQ CVRRVTDAQL ATLNLSSWVA AGNAAEPINP
RVLEEFFEKF APSGFKWETF APAYGLAENT LLVSTSPRNT PPVLCLVEKT KIEQNKIVEA
TTWDDGVRAI PGCGRLVCET QVAIVNPDTL TRCAADEVGE VWVADPSVAG GYWQRPQESE
STFRAKITGN NEVSFLRTGD LGFIKGGELF ITGRIKDLII IRGTNHYPQD LEWTVQEIHP
ALRPDYGAAF SIDVDGVEQL VIVQEVKRKP EEEFNTDEVL TNIRQAIAEI HELQAYAVVL
VKPGNVLKTS SGKIQRRACK ASFLAGELEV LADWSENPKY TASYRRLQGE VDSLLEKVQV
TH