Gene Ava_1637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1637 
Symbol 
ID3681881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2058737 
End bp2059912 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content42% 
IMG OID637716977 
Productpermease YjgP/YjgQ 
Protein accessionYP_322155 
Protein GI75907859 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0299198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCCA AGAAACTCTC GTCTTTTTAC AGCTTTCATT CGCTGCTGCC TTTTACAATT 
ATGGATCGCT ACTTGACTAG CGAATTACTG CCGACATTTT TGTTTGGTGT TGGGGCTTTT
TCATCCATTG GTGTGACGAT TGACGCTGTA TTTGAGTTAG TCAGAAGAGT TGTAGAGTCT
GGACTACCCG TGAGTATTGC GGTGCAGGTT TTCTTATTAA AACTGCCTAA TTTCATCGTG
TTGGCTTTCC CCATGTCTAC GCTGTTGGCG ACTTTGATGA CTTATAGTCG TCTATCAAGC
GAAAGTGAGT TGATTGCTTT GCGTGGTTGT GGGGTGAGTG TCTATCGCAT GGTGATGACG
GCGGTAATGT TGAGTTTTGT CGTCACAGGG TTGACATTTT TATTTAACGA GCAAATTGCC
CCAGCAGCAA ATTACCAAGC AACTCTCACT TTAGACAAAG CCCTGAAATC AGATAAGCCC
AAACTCAAAC AACAGAATAT TTTTTACCCT GAATATCGGG ATATACAAGA GAAAGATGGG
ACAAAGAACA GAATATTAAC CCGCCTGTTT TATGCCGACC AGTTTGACGG AAAACAGATG
AAAGGGTTAA CTATCATCGA CCGTTCAACA GATGGTTTAA ATCAAATTGT CGTCGCAGAA
TCTGCTGAGT GGAACGGCGC ACAAAGCATC TGGGATTTTT ATAACGGTAC CATTTATTTA
GTAGCACCCG ATCGCTCTTA TCGTAATATT CTCCGATTTG AAAAGCAACA ACTCAAACTA
CCCCGTACAC CCTTAAGTTT GGCAGAACAA AGCCGCGATT ATGGGGAAAT GAATATTGCC
CAAGCTTTAG ACCAGCTAAA TATTGAACGC CTTGGTGGCG ATCGCCAAAA AATTCGTAAA
CTGGAAGTAA GAATCCAACA AAAATTTGCT TTGCCTTTTG TTTGTGTAGT ATTTGGTTTG
GTAGGTGCAG CGATGGGAAC CATACCTCAA CGCACAGGCA AAGGCACTAG TTTTGGTATT
AGTGTCATAG TAATTTTTTC TTACTACTTA CTGGGTTTTA TCACTGGCGC TTTAGGACAA
GCTGGTGTTT TTTCTCCCTT TATCGGCGCG TGGCTACCAA ACTTTATTGG ACTAGGAGTA
GGAATCTTCT TATTAGTGCG GGTTGCTCAA CGCTAA
 
Protein sequence
MVAKKLSSFY SFHSLLPFTI MDRYLTSELL PTFLFGVGAF SSIGVTIDAV FELVRRVVES 
GLPVSIAVQV FLLKLPNFIV LAFPMSTLLA TLMTYSRLSS ESELIALRGC GVSVYRMVMT
AVMLSFVVTG LTFLFNEQIA PAANYQATLT LDKALKSDKP KLKQQNIFYP EYRDIQEKDG
TKNRILTRLF YADQFDGKQM KGLTIIDRST DGLNQIVVAE SAEWNGAQSI WDFYNGTIYL
VAPDRSYRNI LRFEKQQLKL PRTPLSLAEQ SRDYGEMNIA QALDQLNIER LGGDRQKIRK
LEVRIQQKFA LPFVCVVFGL VGAAMGTIPQ RTGKGTSFGI SVIVIFSYYL LGFITGALGQ
AGVFSPFIGA WLPNFIGLGV GIFLLVRVAQ R