| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1624 |
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| Symbol | |
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| ID | 3681868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 2035020 |
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| End bp | 2038550 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716964 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_322142 |
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| Protein GI | 75907846 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.228401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATC AGGTTGGTGG TAGTCTCCCT AGTGATGATC CTAATTATGT TATCCGTCAG
GCGGACAAAC AACTCTACGC CAGCCTCAAA GCTGGTGATT TTTGTTATGT CTTAAATTCT
CGCCAAATGG GGAAATCATC TCTACTACAT CGCACAAGCA ACCATCTGAC AAAAGAAGGC
CATATTTGTA TTTATATAGA TGTGACACGC TTGGGTAGTG AGGATACAAC AACTGAACAA
TGGTACAAAG GGATTATTAT CAGTATTTTT TACAGCTTAA ATTTGTCTGA AAAAGTCAAT
TTTCAGCAAT GGTGGAAGAT GCAGTCTGGT CTTTCCCCCA TACAGAAGTT AAATCAATTT
GTAGAAGAGG TGCTACTGCC ACACAATCAA AGTGGGCGTA TCTTTATTTT TATTGATGAG
ATTGATAGTT TGTTGAGCTT GAACTTTTCG GTTAGTGACT TTTTTGCCTG GATTCGTCAT
TGTTACAACC AAAGGGCCCA TGACCCCAAA TTTCAACGTT TAGGATTTGC AGTGTTCGGA
GTAGTGAGTC CATCTGAACT GATTACCGAT AAGCGTCGTA CACCCTTTAA CATTGGTACA
GCAATTCAGT TGTATGGTTT TACACTCGAT GAAGCAACAC CATTACTCAA AGGGTTAGAA
GAAGTAATTA GTCAACCCCA AGCAGTATTA CAGAAGATTA TTGATTGGAC GAGTGGACAA
CCATTCCTAA CCCAAAAACT TTGTCAATTA GTGGTGCAGA CTGCATGGAA CACACCAAAC
CGCAAAATTG ATTTACCTCC AGCCACAGCC GGGTATTGGG TAGAACAACT GGTACAAAAG
CAGATTATTC AATATTGGGA AGCAAAAGAC GAACCAGAAC ACCTACGCAC CATTCGCGAT
CGCCTCCTCT TTAACGAAAA ACGCGCCGGC AGGTTGTTAG GGATTTATCA ACAAATGCTG
CAAGCTGAGT CCGGTAATTT ACCTGTGGAA ATCGATGATA GTCAAGAACA AAAAGAACTA
TTATTATCTG GTTTAGTTGA GAAACAGCAA GGCTATCTCA AAATTAAAAA TCCCATTTAT
CGCTATGTTT TCCATCATGA ATGGGTAATC AGACAATTAG ATAATCTCCG CCCTTACTCA
CAAATCTTCA ACGTTTGGGT AGCCTCTGGT TATCAAGATG AGTCTCGTTT ACTGCGGGGA
CAGGCGCTAA AAGATGCTCA AGATTGGTCC CAGGGCAAAA GTCTGAGCGA TTTGGATTAT
CGTTTCCTCG CAGCCAGCCA AGAATATGAA CAGCGCGAAA TCCAAACAGC CTTAGAAGCA
GCACGAGTCA AAGAAGTAGA AGCGCGACTA GTGCAAGAGA AAAAAACTGC TAAATTACAA
AGATTGCTGT TGATAGCTAT GTGCGTTAAG TTTCTGCTCT CTAGCAGTTT GGCTATGGGA
ATCTACATTT TGTACCGCCA AGCTAAAAAC AGCGAATTTC AAGCTAAAAA CAGCGAAATT
CGAGCCTTAA TATCTTCTTC TGAGGGAATG TTTGCCTCAA ATCGCAGGTT AGATGCACTC
ATAGAAGCAA TTAAAGCCAA AGATCGGCTA AAAAAACTAG AAAACCCCAA CGCAGATATT
ACAAATCAAG CGAATAATGT ACTGCGGCAA GCTGTTTATG GTGCAGATGA GTCCAACCGT
TTTTGGGGAC ACACGGCAGC TGTGATGGCA GTAGATGTCA GTCCCGATAG TTCTCTGATT
GCTTCGGCTA GTATAGATAG AACCATCAAA CTTTGGCGAC GAGATGGAAC CAAAATTACC
ACCCTTAAAG GTCATCAAGG AGCAGTGAGA TCGGTGAGGT TTAGTCCTGA TGGTCAGATG
GTGGCTTCAG CGAGTGAGGA TGGTACTATT AAACTTTGGA AACTCAATGG CACTTTGCTG
AAGACTTTTA AAGGTCACAC TGCTTCAGTC TGGGGAGTAG CCTTTAGTCG GGACGGTCAA
TTTCTCGCCT CTGCTAGTTG GGACACAACG GTGAGACTGT GGAAACGTGA TGGTACTTTA
CTCAACACTT TTCGAGATAG CAAAGAGGCA TTTTGGGGAG TTGCATTTAG TCCAGATGGT
CAAATTGTGG CGGCTGCCAA TCTGGACGGA ACAGTAAAAC TCTGGCAAAG ACAAGGTTCT
GGGTGGCAGG AAGCCAAACC TCTACAACCC CTCAAAAGTC ACACAGCTTG GGTTGTGGGA
GTAGCTTTCA GTCCTGATGG TCAGACACTT GCTTCCAGCA GTGAAGACAA AACTGTCAAA
CTTTGGCGGC GAGATCCCGC AGATGGCAGT TACCGCCTTG ATAAAACTCT CAAACAAACG
ACTGGGATTG CTGGAGTCGC CTTTAGTGCC GATGGTCAAA CGATCGCCTC TGCCAGTCTG
GACAAAACCA TTAAACTGTG GAACATCGAT GGTACAGAAC TGAGGACACT GAGAGGACAT
AGCGCTTCTG TTTGGGGTGT TACTTTTAGT CCAGATGGCA GTTTTATCGC TTCTGCGGGT
GCTGAAAACG TTATCAGACT CTGGCAAAGT CAAAATCCCA TGCAAAAGAG TGTCACTGCC
CATTATGGGG GTATTTGGTC GATAGCAATT ACATCAGATA GTTCTACCGT TGGCACAGCT
AGCCATGATA ATACTGCTAG ACTTTGGAGT CGCCAAGGCG GATTGGTGAA AACTTTCACC
CAAGAGAAGG GGGGAATTAT CGCCATTTCC TTTAGTGCAG ATGGCAAGCT AGTTGCCCTT
CCCACTTATA ATGAGACAGT TTTACTCAAA AAGCCAGATG GTTCTGATGT TGCGAGTTAC
AAAAATACTC AAGGTAAAAT TACAGCAGCA GTTTTGAGTC CCGATGGTCA AGCGATCGCG
ATCGCTAATG TTCACAAGGT TGCTCAAATA TGGCGGCGCA ATCAGCCTAC ATCCCAGGTT
CTCAAAGGTC ATCAAGCTGA AGTTTGGCAG GTGGCTTTCA GTCCTAATAG TAAAATCGTG
GCTTCAGCCA GTGGTGATAG TACAGTTAAG TTATGGACTC TCGATGGTAA GTTGCTGACA
ACCCTTGCTG GACACTCTTC GGTAGTCTGG AGTGTCGCCT TCAGTCCCGA TAATAAAATG
GTAGCTACTG GTAGTGGTGA TAATACAGTT AAGCTGTGGA CTATTGATGG CAAGCTTTTG
AGAACATTTA CAGGTCACAC AGCTGCGATT TGGGGTGTAG CATTTAGTCC CGACGGCAAA
ATACTAGCCT CTGGTAGTGT GGATGCTACC GTCAAGCTGT GGAAAATGGA TGGTACAGAA
CTAACAACTC TCACCGGACA TACAGCAGCC ATTAGGAAAA TTGCGATCAG CCGGGATGGC
ACAATTCTAG CTTCTGGGGG TGATGACAAC ACCCTAATTT TGTGGAATTT ACCCCAGATT
CTCAGCCTAG ATGCCCTAAC TTATGGTTGC AATCTAGTCA AAGATTATTT GCAAACTAAC
ACAGGCTTGG AGGAAGGCGA TCGTCATATA TGCAATCATC TTGAGAATTA A
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| Protein sequence | MKYQVGGSLP SDDPNYVIRQ ADKQLYASLK AGDFCYVLNS RQMGKSSLLH RTSNHLTKEG
HICIYIDVTR LGSEDTTTEQ WYKGIIISIF YSLNLSEKVN FQQWWKMQSG LSPIQKLNQF
VEEVLLPHNQ SGRIFIFIDE IDSLLSLNFS VSDFFAWIRH CYNQRAHDPK FQRLGFAVFG
VVSPSELITD KRRTPFNIGT AIQLYGFTLD EATPLLKGLE EVISQPQAVL QKIIDWTSGQ
PFLTQKLCQL VVQTAWNTPN RKIDLPPATA GYWVEQLVQK QIIQYWEAKD EPEHLRTIRD
RLLFNEKRAG RLLGIYQQML QAESGNLPVE IDDSQEQKEL LLSGLVEKQQ GYLKIKNPIY
RYVFHHEWVI RQLDNLRPYS QIFNVWVASG YQDESRLLRG QALKDAQDWS QGKSLSDLDY
RFLAASQEYE QREIQTALEA ARVKEVEARL VQEKKTAKLQ RLLLIAMCVK FLLSSSLAMG
IYILYRQAKN SEFQAKNSEI RALISSSEGM FASNRRLDAL IEAIKAKDRL KKLENPNADI
TNQANNVLRQ AVYGADESNR FWGHTAAVMA VDVSPDSSLI ASASIDRTIK LWRRDGTKIT
TLKGHQGAVR SVRFSPDGQM VASASEDGTI KLWKLNGTLL KTFKGHTASV WGVAFSRDGQ
FLASASWDTT VRLWKRDGTL LNTFRDSKEA FWGVAFSPDG QIVAAANLDG TVKLWQRQGS
GWQEAKPLQP LKSHTAWVVG VAFSPDGQTL ASSSEDKTVK LWRRDPADGS YRLDKTLKQT
TGIAGVAFSA DGQTIASASL DKTIKLWNID GTELRTLRGH SASVWGVTFS PDGSFIASAG
AENVIRLWQS QNPMQKSVTA HYGGIWSIAI TSDSSTVGTA SHDNTARLWS RQGGLVKTFT
QEKGGIIAIS FSADGKLVAL PTYNETVLLK KPDGSDVASY KNTQGKITAA VLSPDGQAIA
IANVHKVAQI WRRNQPTSQV LKGHQAEVWQ VAFSPNSKIV ASASGDSTVK LWTLDGKLLT
TLAGHSSVVW SVAFSPDNKM VATGSGDNTV KLWTIDGKLL RTFTGHTAAI WGVAFSPDGK
ILASGSVDAT VKLWKMDGTE LTTLTGHTAA IRKIAISRDG TILASGGDDN TLILWNLPQI
LSLDALTYGC NLVKDYLQTN TGLEEGDRHI CNHLEN
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