Gene Ava_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1619 
Symbol 
ID3679176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2027608 
End bp2028585 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content42% 
IMG OID637716959 
Producthypothetical protein 
Protein accessionYP_322137 
Protein GI75907841 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0869358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0689517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAT TAATCGTTAC ATTTAGCAAT GACAACGAAA GCATTCCTTT AGTAATCAAA 
GAAATAGAAG CCAGGGGAGA AAAAGCATTT CGCTTTGATA CAGATAGATA TCCCACCGAA
GTTAAGTTAG ATATTTACTG CGGTGATACT GAACGGGTAA TTATTACTGA TGGCGAACAA
AAGCTCGATT TGAGTGAGGT ATCATCAGTT TGGTATCGGC GGATGCGTTA CGGGCAGAAA
ATCCCCGACT CAATGGACAA GCAATACAGA GATGCGTCTA TTCAGGAATG TCGCGTTACT
GTCAGGGGTA TGATTGCCAG CCTGCCAGGA TTTCACTTTG ATCAAATGGC AAATGTAGAC
CGGGCTAATA ATAAGCAACT ACAGTTGAAA GTTGCCAAAG AAGTTGGACT TTTAACTCCC
CGTACCTTAA CTTCCAACAA TCCCGAAGCT GTGAAGAAAT TCGCTCAAGA TTGTCCGCAA
GGCATCATCA CTAAAATGCT TTCTTCCTTC GCTATCTATG ATGACCAAGG GCGAGAAAAT
GTTGTATTTA CTACTCCAAT TACAAATGAC GATTTGGAGA ATATGGAAGG ACTGTGTTTT
TGTCCAATGA CGTTTCAAGA AAACATACCG AAGGCACTGG AGTTGAGGAC AACTATTGTC
GGACACCACG TATTTACTGC CGCAGTGGAC TCCCAAAGTT TGCAAGGGTC TACTTATGAC
TGGCGCAAAG AAGGGAAAAA CTTAGCTAAG AATTGGCAGC CTTACAACTT ACCAGAAGAT
ATTGAGAAAA AACTACTCAA ATTGATGGCT AATTTTGGCT TAAAGTACGG AGCAATTGAT
ATCATTGTCA CCCCTGATGG TCGCCATGTA TTCCTAGAAG TTAACCCAGT CGGGGAATTT
TTCTGGATGG AAATATATCC GCCATACTAC CCTATTTCCC AGGCGATCGC CGAAATATTA
CTAACTCATA AAAGTTAG
 
Protein sequence
MTVLIVTFSN DNESIPLVIK EIEARGEKAF RFDTDRYPTE VKLDIYCGDT ERVIITDGEQ 
KLDLSEVSSV WYRRMRYGQK IPDSMDKQYR DASIQECRVT VRGMIASLPG FHFDQMANVD
RANNKQLQLK VAKEVGLLTP RTLTSNNPEA VKKFAQDCPQ GIITKMLSSF AIYDDQGREN
VVFTTPITND DLENMEGLCF CPMTFQENIP KALELRTTIV GHHVFTAAVD SQSLQGSTYD
WRKEGKNLAK NWQPYNLPED IEKKLLKLMA NFGLKYGAID IIVTPDGRHV FLEVNPVGEF
FWMEIYPPYY PISQAIAEIL LTHKS