| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1596 |
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| Symbol | |
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| ID | 3678722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1971160 |
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| End bp | 1971738 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716936 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_322114 |
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| Protein GI | 75907818 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000620531 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAATAC GCTGCCGTAT GGAAAAAAAA CAAGAAAACA TCAAACTGGA ACGACAGGAC
TGGATTAATG CTGGTTTAAA AGTTTTGGCG GAGGGAGGAA TTGAAGCCGT CAGAGTAGAA
CCACTTGCCA AGTTAATCAA GGTGACAAAA GGTAGCTTTT ACTGGCACTT CAAGAACCGA
GATGATTTGC TAGAAGCGAT TTTACAGGAA TGGGTGAAAG GTGAAACCAA TAATTTAATT
GAGCGAGTCG AAACGATAGG TGGGGACGCA ACGACTAAAT TGCTGCATTT ATTTGAATTA
GCAATTGAAA TTGATGGTCG ATTAGAAAAT GCAATTCGAG CTTGGGCTGC AAAAGCTGCA
AATGTCGCCG AGATTATGCT TCAAGTAGAT CAAAGTCGGC TAAATTACAC ACAAAATTTA
TTCTTGCAAG TTGGCTTTAC ACCTTTAGAG GCGAAAGTCC GCGCTCAAAT GGCTTATTAC
TCACTCGTTG GTGAATTTAC GGTGGGAACA AGACCGAATC AGGCTGAACG TCTAGCAGAG
GTCATATTTG AACACGCTAT CCTTACTAGA CGAGATTAA
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| Protein sequence | MSIRCRMEKK QENIKLERQD WINAGLKVLA EGGIEAVRVE PLAKLIKVTK GSFYWHFKNR
DDLLEAILQE WVKGETNNLI ERVETIGGDA TTKLLHLFEL AIEIDGRLEN AIRAWAAKAA
NVAEIMLQVD QSRLNYTQNL FLQVGFTPLE AKVRAQMAYY SLVGEFTVGT RPNQAERLAE
VIFEHAILTR RD
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