Gene Ava_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1594 
Symbol 
ID3678720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1969172 
End bp1970557 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content44% 
IMG OID637716934 
Producthypothetical protein 
Protein accessionYP_322112 
Protein GI75907816 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00372727 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCA CCATTAGCAC CACCCACTCC CCAGCGACAG AGTTAGGCTA CTTACTCCAT 
AAGCACCCAG ACCGTTGTCA GTCATTTTCA CTGTCATTTG GACAGGCTCA CGTTTTTTAT
CCAGAAGCGA ATGAACAGAA ATGCACGGCG GCGCTGTTGT TGGATGTTGA CCCGGTAAAG
TTGGTGCGCG GGAAAGGTGC GACATTGGAA CAGTATGTGA GCGATCGCCC TTATGTGGCA
TCATCTTTTA TGAGTGTAGC GATCGCACAG GTATTTAGTA CAGCTTTAGG CGGACGTAGT
AAGGATAAGC CAGAATTAGC CCAAAAGTCT CTACCTTTGG TAGCGAAACT ATCTGTTTTA
CCTTGTCGTG GTGGTGAAGG TTTTCTGCGA CAATTATTTG AGCCTTTGGG TTACACTGTA
AGTGCCCAAG GTCACGTTTT AGATGAAAAA TTTCCAGATT GGGGAAATAG TAAATATTTC
ACAGTTGAAC TCCAGCACAC CATACCCTTG AGTGATTTGT TAAGCCATCT CTACGTCCTG
ATTCCCGTAC TAGATGATGA GAAACACTAT TGGGTCAACG AAGAAGAAAT CGAAAAGTTA
CTACGTCATG GTGAGGGTTG GTTATCACAA CATCCAGCAC GAGAACAAAT CACCAGACGT
TACCTCAAAC GACAGTACCG TTTAACTCGC ACTGCTTTAG CACAGTTAGC AGAGGAAGAT
CATCCAGACC CTGACAGTGC GGAAGAAACC CACGCTGAGG AAGAAGCGGC GGTAGAAAAG
CCCATTAGCT TGAACCAACA GCGTATGAAT GGGGTGGTTG CTGCGTTAAA ACAAAGTAAT
GCTAGGCGCG TTATTGATTT GGGTTGTGGT CAAGGAAATT TATTAAAAAT CCTCTTAAAA
GATAGCTTTT TTGAGCAAAT TACAGGTGTA GATGTTTCCT ACAGGTCACT AGAAATTGCC
CAAGAAAGAT TAGACCGCTT GCGTCTTCCC CGCAACCAGT GGGAACGTTT GCAATTAATT
CAAGGCGCGC TTACTTATCA AGATAAACGC TTTCATGGTT ATGATGCTGC GACCGTGATT
GAGGTGATTG AGCATCTTGA TCTATCACGT TTGGGTGCAT TTGAGCGAGT TTTATTTGAA
TTTGCTCAAC CGAAAATCGT GATAGTAACC ACACCAAATA TTGAATATAA TGTCAAATTT
GCCAATTTAC CAGCAGGGAA ACTACGCCAT AAAGATCATC GCTTTGAATG GACGCGATCG
CAATTCCAAA ATTGGGCAAA TAAAATCACA GAACGCTTTG CTTATAACGT CCAGTTTCAA
CCTATAGGAG AAGCAGACCC AGAAGTTGGT TCACCTACAC AAATGGCAGT TTTTATACAT
AGGTAA
 
Protein sequence
MLLTISTTHS PATELGYLLH KHPDRCQSFS LSFGQAHVFY PEANEQKCTA ALLLDVDPVK 
LVRGKGATLE QYVSDRPYVA SSFMSVAIAQ VFSTALGGRS KDKPELAQKS LPLVAKLSVL
PCRGGEGFLR QLFEPLGYTV SAQGHVLDEK FPDWGNSKYF TVELQHTIPL SDLLSHLYVL
IPVLDDEKHY WVNEEEIEKL LRHGEGWLSQ HPAREQITRR YLKRQYRLTR TALAQLAEED
HPDPDSAEET HAEEEAAVEK PISLNQQRMN GVVAALKQSN ARRVIDLGCG QGNLLKILLK
DSFFEQITGV DVSYRSLEIA QERLDRLRLP RNQWERLQLI QGALTYQDKR FHGYDAATVI
EVIEHLDLSR LGAFERVLFE FAQPKIVIVT TPNIEYNVKF ANLPAGKLRH KDHRFEWTRS
QFQNWANKIT ERFAYNVQFQ PIGEADPEVG SPTQMAVFIH R