| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1585 |
|---|
| Symbol | |
|---|
| ID | 3678711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1956856 |
|---|
| End bp | 1957569 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637716925 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_322103 |
|---|
| Protein GI | 75907807 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000106738 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGG GTGAAATTCT GAGACATTAT GCTGCTGGCA AACGCAACTT TCAGCATATC
AATCTGCAAG AAGTAGAATT AACAAATGCA AGCCTTACAG GTGCAGATTT GAGCTACGCC
GATTTACGTC AGACGCGACT TGGTAAGAGC AACTTCAGCC ACACCTGTTT ACGAGAAGCA
GACTTGAGCG AAGCCATTCT CTGGGGAATA GATTTGAGTG AAGCCGATTT GTATCGCGCC
ATCCTCCGCG AAGCAGATTT AACAGGTGCA AAGTTAGTCA AGACTCGTTT GGAAGAAGCC
AACTTAATCA AGGCTAGTTT GTGCGGAGCT AATTTGAATA GTGCTAATCT TTGTCGTTGC
TTACTCTTTC AAGCAGATTT ACGTCCCAGT TCCAACCAGC GTACAGATTT GGGCTATGTT
CAGTTAACTG GGGCAGATTT AAGCTACGCT GACCTGAGAG CGGCTTCTCT CCATCACGCC
AATTTAGATG GTGCAAAGCT GTGTCGAGCG AATTTTGGTC GGACAATTCA GTGGGGAAAT
CTGGCGGCGG ATTTAAGCGG GGCTAGCTTG CAAGGTGCAG ACTTGAGTTA CGCAAATTTG
GAAAGTGCCA TTTTGCGAAA AGCAAATCTG CAAGGTGCAG ACTTAACAGG AGCAATTCTC
AAAGATGCTG AACTACAGGG AGCTATTATG CCTGATGGTT CAATTCATGA TTGA
|
|---|
| Protein sequence | MNVGEILRHY AAGKRNFQHI NLQEVELTNA SLTGADLSYA DLRQTRLGKS NFSHTCLREA
DLSEAILWGI DLSEADLYRA ILREADLTGA KLVKTRLEEA NLIKASLCGA NLNSANLCRC
LLFQADLRPS SNQRTDLGYV QLTGADLSYA DLRAASLHHA NLDGAKLCRA NFGRTIQWGN
LAADLSGASL QGADLSYANL ESAILRKANL QGADLTGAIL KDAELQGAIM PDGSIHD
|
|---|
| |