Gene Ava_1580 details

Gene Information

• Locus tag: Ava_1580
• ID: 3681123
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: +
• Start bp: 1951222
• End bp: 1951980
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637716920
• Product: hypothetical protein
• Protein accession: YP_322098
• Protein GI: 75907802

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.290689
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCAGATA AGCAGAATTT AGAAGAAAGG TTAATATCTC AGGTAGCTGA AAGAAGCATA 
TCAAATCAGC TAGATACAGC CGAGCAAATT GACATTTATG TCCAAACTGA TATTTTAAAA 
GTAGTTCAAG GACAAGCTGA TGGCGTGACA GTTAGTGGTC AAGGCTTAGT AACTAAACAA 
AATATCCGTG TTCAAGAAAT CCAAGTAAAA ACAGATAGTA TTGCTATCAA TCCACTAAGT 
GCCATTTTTG GAGAAGTTCA ACTAGATAAG CCTGTAAATT TAACTGCTCG TGTCATTCTC 
ACAGAAGCCG ATATTAATTC TGCACTTACA TCTGATTTTA CTCGTAATTT TATGCAAGAT 
TTCGAGTTAA AAGTGGATAG AGAAATTATT AGTTTTGAAA TGCAAGATAT GCAAATATTT 
TTGCCTAGTG ATGGACAGAT GGGCTTTCGC GGTAATTTTT TATTAAAAGA GAAGAATCAT 
CGGCGATCAC TTGGTTTTAC TGCTATGCTT CGTCCCCGAA CTCATTCCCA ACCTATAATA 
TTAGAAAGTT TCCATTGTAC TCAAGGAGAA GGGGTTTCTT TAGAATTAAT TATGACATTG 
GTGCAGAAAG CTCAAGAACT AGTAAATCTC CCTTATCTTG TTTGGGAAGG CATGAAGATT 
CGTATTAAAA ATATGGAAAT TCGCCAAAGT ATATTGATAC TTTTATTAGA AGTAAATCTC 
GCTCAATTAC CAGAATCAAT CATGGAAAAT TCCGATTAA 

 

Protein sequence

MPDKQNLEER LISQVAERSI SNQLDTAEQI DIYVQTDILK VVQGQADGVT VSGQGLVTKQ 
NIRVQEIQVK TDSIAINPLS AIFGEVQLDK PVNLTARVIL TEADINSALT SDFTRNFMQD 
FELKVDREII SFEMQDMQIF LPSDGQMGFR GNFLLKEKNH RRSLGFTAML RPRTHSQPII 
LESFHCTQGE GVSLELIMTL VQKAQELVNL PYLVWEGMKI RIKNMEIRQS ILILLLEVNL 
AQLPESIMEN SD