Gene Ava_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1579 
Symbol 
ID3681122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1950284 
End bp1950739 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content41% 
IMG OID637716919 
ProductTonB box-like 
Protein accessionYP_322097 
Protein GI75907801 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0694121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTA CTCGTTGCGT AATTCCTGTT ATTAAATCTC CCAAAGATTA CCAAGTATAT 
CGTATTAGCC CTCACGATAC AAATCGATTA GCAATTATTT TTGATTCCAC CAATGCCAAT
ACTTCCCTAA CCTGCTGCGT AGAAATTTTT GAAGTCGGTG GACAAACACC CCCTAATCGA
CATCAATGGG CGGTAGAAAT GTTTTTTGTC ATCAAAGGGG AAGGTATAGC CATGTGTGAC
GGCAAAAAAG TTCCCATTAA AGCCGGAGAT AGTTTATTAG TACCTCCCAC CGGCACCCAT
TTAATCAAAA ATACAGGCTC TAGTCGCCTG TACACATTAA CAATTATGGT TCCTAACGAA
GACTTCGCCG AACTAATTCG TAGTGGTACA CCCTTAGAGT TAGATGCAGA AGATATGGCA
GTACTCGGCA GATTAGATGC TTTGATGACT TGCTAA
 
Protein sequence
MQATRCVIPV IKSPKDYQVY RISPHDTNRL AIIFDSTNAN TSLTCCVEIF EVGGQTPPNR 
HQWAVEMFFV IKGEGIAMCD GKKVPIKAGD SLLVPPTGTH LIKNTGSSRL YTLTIMVPNE
DFAELIRSGT PLELDAEDMA VLGRLDALMT C