Gene Ava_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1576 
Symbol 
ID3681119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1947028 
End bp1947864 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content41% 
IMG OID637716916 
Producthypothetical protein 
Protein accessionYP_322094 
Protein GI75907798 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.833664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCG ACTCCATTTT TTACCAAATT TTTAAGCGAT TTCCTGCTTT AATTTTTGAG 
CTTGTTGATG ACCGTCCTGA ACAAGCTCAG AATTATCGAT TTGAGTCAGT TGAGGTAAAA
GAAACTGCCT TTCGTATTGA TGGGGTCTTT TTACCTCCAG AAGATGCAAC ACCCAAGATA
ATCTTTTTTG CGGAAGTTCA GTTTCAGAAA GACGAAACTC TTTATCATCG TTTCTTTACC
GAATCTTTGA CGTATTTGTA CCGAAATCAG TCTCAATACG ACGATTGGCA TTGTGTAGTA
ATTTTTCCAT CACGTTCTTT GGAACCAACT GATACAAGAA CTCATCGAAT ATTTTTAAAC
AGCGACCAAG TACAACGCAT TTATTTAGAT GAGTTAGGTA CTTCTAGTAT GCCGATAGGC
ATCAATTTAA TGCAGTTGAC GATCGCATCC TCTGAAACGA TCGCACAGCA AGCGCGTCTT
TTGATTGAGC AGGTACAATT AGATTCAACA GGCACACTGC CGAAAAACGA GATAATAGAC
ATTATCACCA CAATTGCTGT TTACAAGTTT TCTTCATTAA GTAGAGAAGA AGTGGAAGCC
ATGCTAGGAC TGACTTTAGA GGAAACAAGG GTCTACCAAG AGGCGAAAGC TGAGGGTCGA
GAAGAGGGTC GAGAAGAGGG TCGAGAAGAA GGGCGAGAGG AACGGGAAGC TGAATTGTTG
AGAATAACTG TACCTTTGTT ACTAAAAACA GGGATGAGTA TAGAACAGAT TGCTCAACAA
CTCAAGGTTG ACGTAGAAGC CATCCAACTT GCTGCACAGC AGAACACGGA CAAATAA
 
Protein sequence
MKRDSIFYQI FKRFPALIFE LVDDRPEQAQ NYRFESVEVK ETAFRIDGVF LPPEDATPKI 
IFFAEVQFQK DETLYHRFFT ESLTYLYRNQ SQYDDWHCVV IFPSRSLEPT DTRTHRIFLN
SDQVQRIYLD ELGTSSMPIG INLMQLTIAS SETIAQQARL LIEQVQLDST GTLPKNEIID
IITTIAVYKF SSLSREEVEA MLGLTLEETR VYQEAKAEGR EEGREEGREE GREEREAELL
RITVPLLLKT GMSIEQIAQQ LKVDVEAIQL AAQQNTDK