| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1564 |
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| Symbol | |
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| ID | 3681107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1927051 |
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| End bp | 1931703 |
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| Gene Length | 4653 bp |
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| Protein Length | 1550 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716904 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_322082 |
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| Protein GI | 75907786 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.047002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.324166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAC AATTACCTGA TAACGAAGTG CAGAGAATTG CAGCACTTTT AGAGTATAAA
ATTCTTGATA CTCAATCCGA AGCAGCATTT GATGATATCA CACGTTTAGC ATCATATATT
TGTGGAACGC CGATTGCTTT AATCAGCTTA ATTGACCAAA ACCGTCAATG GTTTAAATCA
AAAGTTGGGC TGGAGAGGCG AGAAACACCG CGAGATGAGG CATTTTGCAC TTATACTATT
TTAGAATCTG ATGTCTTTAT CGTGCCTGAT GCTACGACTG ACGAACGCTT TGCGACAAAT
CCATTAGTAA TATCTGATCC CAAAATTCGA TTTTATGCTG GTGTGCCTTT AACTAACCCT
GAAGGCTATT CCTTGGGAAC ACTTTGCGTT ATTGATTACA TACCCAGGAA CTTGAGTCCT
GAACAGATTG AGGCGCTACA AATTCTAGGT CGCCAAGTCA TCAAGCAACT GGAACTGCGT
CGTAACTTAG CAAATCTAGT ACTTGTAAAT AATCAACACA AACAAGCACA AAAAATCCGC
CATCCATTTT TTAAAAAGAT TGCTGGTGGC TTTGGATTAG CATCAGTCAT TTTAGTCTTA
CTTGGCTTGG CTTCCTATCA AAGTGAAATA GAATTAATTC ATAGTAGTAA TCAAGTTCAA
ATAACCCAAG AAAGCATTAA TAACTTAGAA AAACTGCTAT CTCAAATTAA GGATGCAGAA
ACTGGACAAC GCGGTTACAT TTTGACAGGA AAAGACCTTT ATCTGCAACC TTATCAAACA
GCTCTGACAA ACATTGACCA GAAATTTGCG GAACTGAAAA ATACCACTGT TGATCAAGTT
CAACAACAGC GTCTTGTCAT ACTCAAACCT CTGATTACAG CAAAAATCAC TGAACTGAAG
CAAACTATCA AACTACGTCA GAATCAAGGC TTCCAGACAG CATTACAGGT CATCCAATCT
GATAAAGGGC AAACTCTCAT GGATGACATC CGCAAGGTGA TGCGTGAAAT GGAGACAGAG
GAAAAGGTGC GCCTTCAACA GCAATTACAA GCGGTAAAAG CCAGTGGGCA AAAAGTTATT
GTCATCTTGG CGATCGCCAT CGTCTCAGGT TTAATCATTC TCGCTGTTGT TTACTACCTA
ATTTATTGTG AAGTTATTGC ACGCCAGTCG ATGGAAAATA TACTCAACGA AGAGCGTAAT
TTTATTTCGG CAGTACTGGA TACAGTCAGC GCTTTAGTAA TCGTCCTAGA TTCCCAAGGG
CGAATCGTTC GCTTTAATCA AGCTTGTGAG GTAATAACGG GTTACTCATT CGATGAGGTC
AGGGGTAGGC ATTTTTGGAA TCTGTTTTTG CTTCCTGAAG ACGTAGAGTC AAGCAAAGCA
TCTTTTGCAA AGTTTCCCAC AGATTCAAGA GTTTCCGGTA TTCAGGAGTC TGAAAACTAC
TGGGTAACTA AAGATGGTAG TCGGCGCTTA ATTGCATGGT CGAGAACTAT CCTGCAAAAC
CATGAAGGCT CGGTAGAATA CATTATTGGG ACAGGTATTG ATATTACTGA GCGCAAACGT
GCAGACAAGC ATTTAACAAT ACAATATGCC ATCACCCGTG TCTTGGCAGA ATCTACAACG
ATTACCGAAG CTACTCCCCA AATTTTGCAA GCCATCTGTG AAACCTTGAA ATGGGATGTC
TGTGAAATTT GGATGGTAAA TCAGCAAGGA AATTTCTTGA GTTTTTTCGA CCTGTGGGAT
CAAACATCTT TGGAAATGCA GGAGTTTAAA ACCCAAAGTC AGCCAATCAC ATTTGCATCG
GGGATTGGAT TGCCAGGACA GATTTGGGCT AGCGGTCAAC CAATTTGGCT GACCGATATT
GCCGATGATG CTAGCTTTCT CAGAAACCAA TTGGCAGCGC AAGTAGGATT GCGTGGTGCT
TTTGGTTTCC CGATTCGGAG TGGGCAAAAA ATTTTGGGAG TCATTACCTG CTTTAGTCAT
CAAGTTCAGC CGCATGACCC AGATTTGGCA AAAATCATGG ATTCTATTGG CGAACAAGTA
GGGCAGTTTA TCCATCGCAA ACAGGCAGAG GAGGAACTGC AACGGCAAAA CTTGCGATCG
CAATTATTTA CAGAAATCAC CCTCAAAATT CGCCAATCTT TGCAAATTGA AGAAATCTTA
CAAATCACTG TCAAAGAAGT ACAAAAGATT CTCCAGACTG ATCGAGTTTT AATTTATCAG
TTACTGCCTG ATGGTTCTGG AAGTCTAATA ATTGAGGCAG TCGTTGCTGG TTGGGCAGCA
ATTAAAGGAC AAAATATTAC TGATTTTTAT TTGCAAACAG AATATCAACA ACAGTATTGT
CTACAACAAT ATCGCCTGAG GCATCTGGAG GCGATCGCCA ACCTAGATTT GGCAGAGATT
CAACAAAGTC ATCTAGAATT ACTCAGAAAG TTTGGAGTTA AAGCTAATTT AGTTATACCT
ATCCTTGTCA AAGATGAACT CTGTGGCTTA CTAATTGTCC ATCAGTGCGC TAACTCCCGC
CAATGGACAA GTTTTGAGAC CCATCTTTTA CGACAAATAG CAGACCAAGT AGGCATTGCT
GTAGCCCAAG CCCAACTCTT AGAAGTGGAA ACTCGACAGC GACAGGAACT GGAAGTTGCC
CGTAGTCAGG CTGAATTAGC TTCTCATGCT AAAAGCGCTT TTTTGGCGAA TATGAGTCAT
GAAATCCGTA CACCCATGAA TGCTGTCTTG GGGATGACTG GCTTAATGCT AGAAACTCTG
CTCAACCAAG AGCAGCGAGA TTTTATGGAG ACTATTCGCA TTAGTGGTGA TGCACTTTTA
ACTCTCATTA ACGAGATATT GGATCTCTCC AAACTGGAGG CTGGGGAAAT GGCTTTAGAA
AATTTGAATT TTAATTTATC AACCTGTGTA GAAGAAGTTT TAGATTTATT AGCCCCCCAA
GCTCATAGCA AGGGATTAGA AATTGCTGCT TTAATCTATC GCCATGTTCC GATCCAACTC
CAAGGAGATG CCAGCCGTCT GCGACAAATT CTCATGAACC TGATTGGTAA TGCTATCAAG
TTTACTAGTT TTGGGGAAGT AGTAATGCGA GTAGAATTGC GATCGGAAAC TCCGACTACA
GCTATCATCC ACTTTGCCGT TACAGATAGT GGCTTGGGCA TTACTTTAGA AGACCAACAT
AAACTGTTTA CCCCTTTTAC TCAAGTAGAT GCTTCCACCA CGCGTAAGTA TGGTGGTACT
GGTTTAGGAT TAGCCATATG CAAACAACTA GTGACATTAA TGGGAGGAGA AATCGGTGTA
GAAAGTCAGT TAGGCAAAGG TTCTAAATTT TGGTTTGAAA TTCCTTTTGC CAAACAACTC
CAGCCTGTTT CTTTTGTAGA AGATTGCGGA CTGTTAAACA ATCGCCGTTT ACTGGTGGTG
GATGACCACG CCACTAATCG AAAAATTATC TATCACCAAG TTAGTCGATG GGGAATGCAG
GTAGATCAAG CTGATAGAGC TGTTGCTGCT CTAGGCATGA TTGTGGAAGC TTGCCAGCAG
AACAAGCCCT ATGATGTCAT CTTAATCGAT ATGCAGATGC CTGAAATGGA TGGGATGGCT
TTGGGAAAAC AAATTAAGGC CAATTCTGCT ATTCCTCCAA CACCCTTAAT TATGCTCACT
TCAACTAATC AACGTGACGA AGTGCAACAG GCAATTAAGA TTGGATTTGC TGCTTATTTG
GTCAAACCAG TGAAATCATC TCGGTTGCTC GACACTATTA TGAGTGTTTT AAAAACTCCG
TCACAATTGG AAGCGGAGAA GTTGGAAGTA AAGAGTCAAG AGTTAGAAAA GAACAATTTA
GATCACAGCC GCAACCGTAA CTTTACTGCT ACCCAGGCTC AAAATTCTGT TTCCACAAAA
ACTAGAATCC TACTGGCTGA GGATAATTTA GTTAATCAAA AAGTGGCTCT TAAACAACTC
CAAAGCCTTG GTTATACAGC TGATGTTGCG GCTAATGGCA AAGAGGTTTT ACAACTATTA
AAACAAATTC CCTACGATTT GATTTTAATG GATTGTCAAA TGCCAATTCT TGATGGTCTG
GAAACCACAA AAGAAATTCA TCGTTGGGCA GAAAGCTCCT TTGCTAGCGG TCGTCGTCCT
GTGATTATTG CGATGACAGC TAATGCTATG AAAGAAGACA AACAAATGTG TCTAGATGTC
GGCATGGATG ATTACTTGAG CAAGCCTGTG ATGAAAGAAC AATTGGCAAC AGCATTAGAA
TATTGGTGCC AGTTGATACT AAATGCACGA CAGGCGGTAG AATTTGATAT ACATAGTCTT
CCTATTGACT GGGAACACTT ACATCAACTT TCCGAAAACG ATACAGAGTT TGAATTGCAT
TTGTTGCAAA TATTCGTTGA AGATGTCCGA GCTAGATTAG AGTTAGCTAA AGAGGCGATC
GCTAACACAG ACTTTCAAAA AATGGCTCAA CAAGTCCATC AGCTTAAAGG CGCTAGTACC
AATCTCGGAG CTACCGCTAT GTACCTAGCT GCGGAAAGGC TAGAGCAGCT AGCTAACAAC
CAAGAGCGTA GAGGTAGTAT GGAGCTAATT ACAGAAATAG AAGAGTCTGT CAACCAGATT
CAAGCTTTTT TAACTAGAAG CCAAGTTGTT TGA
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| Protein sequence | MKAQLPDNEV QRIAALLEYK ILDTQSEAAF DDITRLASYI CGTPIALISL IDQNRQWFKS
KVGLERRETP RDEAFCTYTI LESDVFIVPD ATTDERFATN PLVISDPKIR FYAGVPLTNP
EGYSLGTLCV IDYIPRNLSP EQIEALQILG RQVIKQLELR RNLANLVLVN NQHKQAQKIR
HPFFKKIAGG FGLASVILVL LGLASYQSEI ELIHSSNQVQ ITQESINNLE KLLSQIKDAE
TGQRGYILTG KDLYLQPYQT ALTNIDQKFA ELKNTTVDQV QQQRLVILKP LITAKITELK
QTIKLRQNQG FQTALQVIQS DKGQTLMDDI RKVMREMETE EKVRLQQQLQ AVKASGQKVI
VILAIAIVSG LIILAVVYYL IYCEVIARQS MENILNEERN FISAVLDTVS ALVIVLDSQG
RIVRFNQACE VITGYSFDEV RGRHFWNLFL LPEDVESSKA SFAKFPTDSR VSGIQESENY
WVTKDGSRRL IAWSRTILQN HEGSVEYIIG TGIDITERKR ADKHLTIQYA ITRVLAESTT
ITEATPQILQ AICETLKWDV CEIWMVNQQG NFLSFFDLWD QTSLEMQEFK TQSQPITFAS
GIGLPGQIWA SGQPIWLTDI ADDASFLRNQ LAAQVGLRGA FGFPIRSGQK ILGVITCFSH
QVQPHDPDLA KIMDSIGEQV GQFIHRKQAE EELQRQNLRS QLFTEITLKI RQSLQIEEIL
QITVKEVQKI LQTDRVLIYQ LLPDGSGSLI IEAVVAGWAA IKGQNITDFY LQTEYQQQYC
LQQYRLRHLE AIANLDLAEI QQSHLELLRK FGVKANLVIP ILVKDELCGL LIVHQCANSR
QWTSFETHLL RQIADQVGIA VAQAQLLEVE TRQRQELEVA RSQAELASHA KSAFLANMSH
EIRTPMNAVL GMTGLMLETL LNQEQRDFME TIRISGDALL TLINEILDLS KLEAGEMALE
NLNFNLSTCV EEVLDLLAPQ AHSKGLEIAA LIYRHVPIQL QGDASRLRQI LMNLIGNAIK
FTSFGEVVMR VELRSETPTT AIIHFAVTDS GLGITLEDQH KLFTPFTQVD ASTTRKYGGT
GLGLAICKQL VTLMGGEIGV ESQLGKGSKF WFEIPFAKQL QPVSFVEDCG LLNNRRLLVV
DDHATNRKII YHQVSRWGMQ VDQADRAVAA LGMIVEACQQ NKPYDVILID MQMPEMDGMA
LGKQIKANSA IPPTPLIMLT STNQRDEVQQ AIKIGFAAYL VKPVKSSRLL DTIMSVLKTP
SQLEAEKLEV KSQELEKNNL DHSRNRNFTA TQAQNSVSTK TRILLAEDNL VNQKVALKQL
QSLGYTADVA ANGKEVLQLL KQIPYDLILM DCQMPILDGL ETTKEIHRWA ESSFASGRRP
VIIAMTANAM KEDKQMCLDV GMDDYLSKPV MKEQLATALE YWCQLILNAR QAVEFDIHSL
PIDWEHLHQL SENDTEFELH LLQIFVEDVR ARLELAKEAI ANTDFQKMAQ QVHQLKGAST
NLGATAMYLA AERLEQLANN QERRGSMELI TEIEESVNQI QAFLTRSQVV
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