| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1563 |
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| Symbol | |
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| ID | 3681106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1924290 |
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| End bp | 1926056 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716903 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_322081 |
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| Protein GI | 75907785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.176735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.279007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCT TGAATAAATT TCGTCAGGGT CAAATTTTTA CTTGGTCGTT ACTAAATATA
TTTTTCCTTG CTGGTTGTTC TTTTCCTCAG GCGGAAACTC CTACAAACTC CACACCCGTA
ACAAACACTA GTACAGGCGA AACCTTACGT CTACTTTATT GGCAAGCACC AACTATTCTC
AATCCTCACC TAGCGCAGGG AACTAAAGAC TTTGAAGCTA GTCGTATCGT CTATGAACCC
CTCGCCAGCC ACGATAAAGA CGGTAAATTG GTTCTGTTTT TAGCCGCAGA GGAACCTACT
CTAAAAAATG GTGGTATAGC CAAAGATGGT AAATCAGTTA CCTGGAAACT CAAGCAAGGA
GTCAAATGGT CTGATGGTCA ACCTTTTACA GCTGCGGATG TGGTATTTAC TTACAAATTT
CTTTCCAATC CGGCTGTCGG TGCTACCACT TCCGCTAATT ACGAAGCTGT GCAAAGCGTC
GAAGCCATCG ACGATTACAC TGTCAAAATT AATTTCCAGA GTCCTAACCC AGCTTGGTCA
CTACCTTTTG TGGGCTTAAA TGGAATGATT ATTCCCCGTC ACATTTTTGA GAAATTTAAC
GGTAGTAACG CTAGGGAAGC GCCAGGTAAT TTGATTCCTA TAGGTACAGG CCCTTATAAA
GTCGGAGAAT TTAAACCCGG TGACACCATT ATCTATGAAG CTAATTCTGT GTTCCGTGAA
GCCAATAAAC CTTTCTTTAA GCGAGTAGAA CTCAAGGGAG GTGGTGATGC GACATCAGCC
GCGAGAGCAG TACTACAAAC TGGAGATGTA GACTACGCTT GGAACCTGCA AGTAGAAGCC
CCGATTCTCA AGCAACTAGA AGCAGCAGGC AAAGGGAAAT TAAAAATTAG TTTTGGTTCT
TTTTTAGAAC GGATTACCAT CAATCATACC GACCCTAATA AACAAACAAA AGACGGCGAA
CGTTCTAGCA CTGAATTTCC TCATCCATTT TTTCAAGACA TCAAAGTGCG TCAAGCATTT
AACTATGCAA TTGATCGGGA CACAATAAAT CAACAATTAT ATGGTTCTAG TGGTCGTCCT
GCCGCCAATA TCCTATTAGC ACCAGAGATT TATAACTCAC CTAATACTAA ATATGAATTT
AGCCCCAAGA AAGCTACTGA TTTATTAGAT GAAGCTGGAT GGAAAGATAC AAATGGTAAT
GGTATTCGAG ACAAAAATGG TGTAGAGATG AATGTTTTGC TTCAGACATC TGTAAATCCA
GTGAGACAGA AAACTCAGGA AATTATTAAA CAAGGATTAA CCTCTATTGG TGTTGGGGTG
GAACTAAAAA GTATTGATGG TAGTATCTTC TTTTCTGGAG ACCCATCGAA CCCAGACACC
TTGGGAAGGT TTCAAGCTGA TTTACAAATG TTTAGTACGG GTAGTACGAA TGTAGATCCT
GGTGCTTATA TGAAAGGCTT TACTTGTAGC GAAATTCCCC AGAAAAAGAA TAACTGGTCA
AAATCCAATC ATTCACGTTA CTGTAATCCT GAATATGATA AGCTCTGGCA ACAGTCCAAC
ACAGAATTAA ATCCTGAAAA ACGTCGGCTG CTATTTATTC AGATGAATGA TCTGCTATTC
AAAGATATTG CTTTAATTCC CTTGATTGCC CGTGCTGATG TCAATGGCGT GAGCAATAGA
CTGGTCGGTG TAGATTTGAC CCCTTGGGAT ACTGATACAT GGAATATTAA AGATTGGCAA
CAAGTCCAGT CTCTTGGTAA TAGGTAA
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| Protein sequence | MGILNKFRQG QIFTWSLLNI FFLAGCSFPQ AETPTNSTPV TNTSTGETLR LLYWQAPTIL
NPHLAQGTKD FEASRIVYEP LASHDKDGKL VLFLAAEEPT LKNGGIAKDG KSVTWKLKQG
VKWSDGQPFT AADVVFTYKF LSNPAVGATT SANYEAVQSV EAIDDYTVKI NFQSPNPAWS
LPFVGLNGMI IPRHIFEKFN GSNAREAPGN LIPIGTGPYK VGEFKPGDTI IYEANSVFRE
ANKPFFKRVE LKGGGDATSA ARAVLQTGDV DYAWNLQVEA PILKQLEAAG KGKLKISFGS
FLERITINHT DPNKQTKDGE RSSTEFPHPF FQDIKVRQAF NYAIDRDTIN QQLYGSSGRP
AANILLAPEI YNSPNTKYEF SPKKATDLLD EAGWKDTNGN GIRDKNGVEM NVLLQTSVNP
VRQKTQEIIK QGLTSIGVGV ELKSIDGSIF FSGDPSNPDT LGRFQADLQM FSTGSTNVDP
GAYMKGFTCS EIPQKKNNWS KSNHSRYCNP EYDKLWQQSN TELNPEKRRL LFIQMNDLLF
KDIALIPLIA RADVNGVSNR LVGVDLTPWD TDTWNIKDWQ QVQSLGNR
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