Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1561 |
Symbol | |
ID | 3681104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1921346 |
End bp | 1922677 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637716901 |
Product | response regulator receiver Signal transduction histidine kinase |
Protein accession | YP_322079 |
Protein GI | 75907783 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.414952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAGA CGCTAAAGAT TTTGGTTGTA GACGATGATG AAGTAGACCG CATGACAGTT CGCCGTGCTT TGGTTAAAGC TGGGGTACGT ATGGAAATGT CAGAGGTAAG TGACGGAAAC ACGGCGCTCT CTATCTTAAG AAATACATCT TTTGATTGTG CCTTCATCGA CTATCGTTTA CCCGACCAAG ACGGTTTAAA CTTAATCGAA ACAATTCGTA GCTTAAATAT CAAAATTCCT TTAGTAGTTT TGACTTCTCA AGGTGATGAA CAAATTGCCG TGGAGTTAAT GAAAGCTGGT GCAACAGATT ACTTATCTAA ATTTAGAGTT TCATCGGAAA CTTTAGCTCA AGTTTTACGT AATGCAATGC GGCTTTATCG TGCAGAAATG CAGACTGCTA TTGCCTACCA ACAACTGAGA GAAAGTCATG AGCAACTGGT GCGAAAAAAT CAAGAATTAG AACGACAACG GCAACAAATC CAAATTCAAA ACTTAAAACT ATTAGAAGCA TCGCGGCTGA AATCTCAATT TCTCGCTACC ATGTCCCATG AATTGAGAAC ACCAATGAAC GCGATTATTG GTTTTTCTCA GATATTGTTA CGCCCTAAAT TCGGCAATCT CACAGGTCAG CAAGCCGATA TGGTAGAACG GATTCTGAAT AATGGCAAAC ATTTATTGAT GCTATTAAAT GAAGTTTTAG ACTTCTCCAA ATTAGAAGAG GGAAGATTAG AACTGAAGCC AGAATTATTT GATTTAACTA AAGTAATTAA CGCTGCCGTT GCGGAAATGC GCTCTCTAGC TGAGGCAAAA AAGCTGTCTT TGCTAGTGCA GATTGACTTA CAAAATCCTT TGCTAGTAAA TGATCCAGTA AGAATTAAAC AAATTCTAAT AAATTTATTA TCTAATGCCA TTAAGTTCAC AGACTCTGGT AGTATTTGGA TCGATGTAAA AGACTTACCA GGAAGTTGGG TGGAAATTAG AGTAAAAGAT ACAGGTATTG GCATAGCATC TAAAGATTTT AAATATATTT TTGAGGCTTT TCGACAAGTT GATCAAAGCA TTACTCGCAA GTATGCAGGT ACAGGTTTGG GGTTGGCAAT TATCGACTCG TTAGTGCAAA TGATGAGTGG TAAAATTATC TTAGAAAGTC AATTGGGAGT AGGTTCAATT TTTACAATTA CATTGCCAAG ACAATTGCCA TTGTCAAACT TATCTCTATC TTCATCATCT GTGCAAGATG CGAAAGAAAT GATGCAGCCA GATCACAAAG TACACCACCC TACGGCTAAA TCCAACCCAG CCCCCAGGAA ATATCATAAT CTCAAGTTAT AA
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Protein sequence | MEETLKILVV DDDEVDRMTV RRALVKAGVR MEMSEVSDGN TALSILRNTS FDCAFIDYRL PDQDGLNLIE TIRSLNIKIP LVVLTSQGDE QIAVELMKAG ATDYLSKFRV SSETLAQVLR NAMRLYRAEM QTAIAYQQLR ESHEQLVRKN QELERQRQQI QIQNLKLLEA SRLKSQFLAT MSHELRTPMN AIIGFSQILL RPKFGNLTGQ QADMVERILN NGKHLLMLLN EVLDFSKLEE GRLELKPELF DLTKVINAAV AEMRSLAEAK KLSLLVQIDL QNPLLVNDPV RIKQILINLL SNAIKFTDSG SIWIDVKDLP GSWVEIRVKD TGIGIASKDF KYIFEAFRQV DQSITRKYAG TGLGLAIIDS LVQMMSGKII LESQLGVGSI FTITLPRQLP LSNLSLSSSS VQDAKEMMQP DHKVHHPTAK SNPAPRKYHN LKL
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