Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1555 |
Symbol | |
ID | 3682287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1910052 |
End bp | 1910765 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716895 |
Product | putative cyclase |
Protein accession | YP_322073 |
Protein GI | 75907777 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.168649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAAGCC TAAAAACGAT CGCATACTCC CGCGTGATTC ACTTAAGTCA TATAATTGAC CCAGATATTC CCCAATGGCC TGGCGACCCT CCCGTTGAAT TTACCACTGT TGCCCAACTC CCTGATGATG GCTATTACCT GCGGCGCTTC GCCATCGGGG AACACAGCGC CACTCATATC AACGCTCCTA ATAGTTTTTA TCAAGCAGGT ATAGGAATTG ACCAATACCC GGCTCAGTCT TTGTTTGTGT CGGCGGTAGT TATCGATATC CAAGCAGCCG CAGCCGTCAA CGCCGATTAT AGACTCACCA TTGATGATAT CTTCGCCTGG GAAGGAGAAC ACGGTGAAAT TCCCAGGGGT AATGTAGTGT TATTACATAG TGGTTGGCAG AATAAATGGT CTGATAAAAA CGCTTTTCTC AACCAAGATG CTGAAGGAAT CATGCACTTT CCGGGTTTTG GTAGTGATGC AACCCAATTT CTCTTGGATG AGCGACAGAT TGCAGGCGTA GGAATCGATA CTCATGGTGT AGACCCTGGA CAAGACACCA GTTTTGCTAC CAACCGCTTA GTATTGGCGC AACAAGGTAT TGTGTTAGAA AATTTGACAA ATTTGCATCA ACTACCAGCA AAAGGTAGTA ATCTGGCGAT CGCAATCCTT AGATTACGCG GTGGCTCAGG TTCGCCAGTG GGAGTTTTGG CATTAGTACC TTAA
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Protein sequence | MSSLKTIAYS RVIHLSHIID PDIPQWPGDP PVEFTTVAQL PDDGYYLRRF AIGEHSATHI NAPNSFYQAG IGIDQYPAQS LFVSAVVIDI QAAAAVNADY RLTIDDIFAW EGEHGEIPRG NVVLLHSGWQ NKWSDKNAFL NQDAEGIMHF PGFGSDATQF LLDERQIAGV GIDTHGVDPG QDTSFATNRL VLAQQGIVLE NLTNLHQLPA KGSNLAIAIL RLRGGSGSPV GVLALVP
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