Gene Ava_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1555 
Symbol 
ID3682287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1910052 
End bp1910765 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID637716895 
Productputative cyclase 
Protein accessionYP_322073 
Protein GI75907777 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.168649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAGCC TAAAAACGAT CGCATACTCC CGCGTGATTC ACTTAAGTCA TATAATTGAC 
CCAGATATTC CCCAATGGCC TGGCGACCCT CCCGTTGAAT TTACCACTGT TGCCCAACTC
CCTGATGATG GCTATTACCT GCGGCGCTTC GCCATCGGGG AACACAGCGC CACTCATATC
AACGCTCCTA ATAGTTTTTA TCAAGCAGGT ATAGGAATTG ACCAATACCC GGCTCAGTCT
TTGTTTGTGT CGGCGGTAGT TATCGATATC CAAGCAGCCG CAGCCGTCAA CGCCGATTAT
AGACTCACCA TTGATGATAT CTTCGCCTGG GAAGGAGAAC ACGGTGAAAT TCCCAGGGGT
AATGTAGTGT TATTACATAG TGGTTGGCAG AATAAATGGT CTGATAAAAA CGCTTTTCTC
AACCAAGATG CTGAAGGAAT CATGCACTTT CCGGGTTTTG GTAGTGATGC AACCCAATTT
CTCTTGGATG AGCGACAGAT TGCAGGCGTA GGAATCGATA CTCATGGTGT AGACCCTGGA
CAAGACACCA GTTTTGCTAC CAACCGCTTA GTATTGGCGC AACAAGGTAT TGTGTTAGAA
AATTTGACAA ATTTGCATCA ACTACCAGCA AAAGGTAGTA ATCTGGCGAT CGCAATCCTT
AGATTACGCG GTGGCTCAGG TTCGCCAGTG GGAGTTTTGG CATTAGTACC TTAA
 
Protein sequence
MSSLKTIAYS RVIHLSHIID PDIPQWPGDP PVEFTTVAQL PDDGYYLRRF AIGEHSATHI 
NAPNSFYQAG IGIDQYPAQS LFVSAVVIDI QAAAAVNADY RLTIDDIFAW EGEHGEIPRG
NVVLLHSGWQ NKWSDKNAFL NQDAEGIMHF PGFGSDATQF LLDERQIAGV GIDTHGVDPG
QDTSFATNRL VLAQQGIVLE NLTNLHQLPA KGSNLAIAIL RLRGGSGSPV GVLALVP