| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1551 |
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| Symbol | |
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| ID | 3682283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1904032 |
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| End bp | 1904727 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637716891 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_322069 |
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| Protein GI | 75907773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0302245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCCTA TTAGTGATAA CTTACATTTT CGTGAACGAC CGATTATTAA TTATTGGTTG
ATTGGTATTA ATATTGTTAT CTTCCTTTGG GAAATCAAAC TAGAACTGAG TGGTGAATTA
GGTGCTTTCA TTAACACTTG GGGTTTAGTC CCATCCCAGA TTAGTACCGC AGTTAATCAT
GCACTGATAA ATCCTGCGGC TTTAGTAGTC GTATTTGGGC GTTTATTTTC TTTGTTGTTT
GCTATATTTC TTCACGGCAG TTTTAGCCAA ATATTGGGGA ATATATTATT TTTATGGGTC
TTTGGTAAAG CGGTAGAAAA TATTTTAGGA CATCAGCGCT ATTTAGGATT TTATCTGGTT
GCTGGAGTTG TCACAGGGTT AGCACAGATT ATCATTGAAC CAAATTTGAC TGTACCACTC
ATTGGTGCAA ATGGAGCGAT CGCCGCAGTT TTGGGAGCGT ATATAATCAA GTTTCCTCAG
GTCAAAATAG ACACTGTTTT ACCGTTAATT ATTATTTATA TCCCCATTGA ATTACCAGCT
TCTTTCTATT CATTATGGTG GTATATTCAA CAATTATTCT ATGGCATTGG TAGTTTAAAC
ATTCCACCGA CGGGAGTCAA TCAACCCAGC CTAGCCTACT GGATGCAGCT TGTAGCCATG
ACTATTGGTG CAGTCTATGT CCGAAAAAAA TTCTGA
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| Protein sequence | MIPISDNLHF RERPIINYWL IGINIVIFLW EIKLELSGEL GAFINTWGLV PSQISTAVNH
ALINPAALVV VFGRLFSLLF AIFLHGSFSQ ILGNILFLWV FGKAVENILG HQRYLGFYLV
AGVVTGLAQI IIEPNLTVPL IGANGAIAAV LGAYIIKFPQ VKIDTVLPLI IIYIPIELPA
SFYSLWWYIQ QLFYGIGSLN IPPTGVNQPS LAYWMQLVAM TIGAVYVRKK F
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