| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1541 |
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| Symbol | |
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| ID | 3682312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1890053 |
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| End bp | 1891822 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716881 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_322059 |
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| Protein GI | 75907763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.67824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0621069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTT TAAATTTAGG TCAACTTGTA TACACCAGCT TTGCTATCGC GGGATTGAGA
ACCGTGGCGA GTAAAGAAGT TCCTCCGGAA ATTCAGCAGG CCTTCTTAGA AAAGGTGGTT
TACCAGTATT GGGATGCCTA TAATCCACCC AGTGCAGGAT ATAGAGCTGC ATACTTACTT
CAGGTAACTT CAGAGGATAA CTTGTTTGGT TGGTTATACA ACGATGGGCT GGATGATTTT
GGTCGCAGCG ATGTTCCATA TTTTCTTTGT TACTATTTAC CTGGCAAACT ACACCCCAGC
CAACTCGAAA ACATTTTTAT TTGTCTATGC ACTGGCCCAA TAACCATCGT AGACAGGCAA
AATCTCCCAG TTTCTTTAGA AAGCTTGGTA ACTCAAAACT TATGGAGTTA CCAGCCTACT
CGTGCTGGGG TAAAAATTCC CAGACAGGTG ATTGAGGAAA GCCAAATTAC CCTCAAGCAG
GAAGAATTGC TCAATTTATT TGTCTGTGCA TCCCAGGATG AAATAAAAGA TACTTCCATA
GCTGATCGAA ATTTACTGAT CGTTAGTAAA CAGAAAATAC GTCTACTAGA CACCCCTACA
ACCCCTAATC AAGCCATTAC CCAGCAGGAA CTACCTCTGG CGGTCAGGAT AGCGGAAAAT
GATCACCAGA TGCCGGCAGC TAAAACTCAT CTCACAGATA ACCAAAAAGC TGTTTTCCCC
TTCCCTGGAA AGTTGACTTT AATGCTGGGG ACAATAGCAA CTGTTGTTTC TCTACTCACC
TTGAATTATT TTCTGAAAAT TGCCCCTTTT GCTGGGACTG TCCAAAAAGT TACCGCACCT
ATCCCCACTC CAAATCCCCC TGTAGACCAG CAAAGTACTA CCCTGACTAA AACATTATTT
GGTCATACAG ATTCGGTTTG GTCTGTTGCA CTCACCAAGG ATGGACAAAC TTTGATGAGT
GCTAGTGAAG ATAAAACTAT TAAAGTTTGG AATCTAGATA CGGCAAAGGT TACAACTACA
CTACAAGGAC ATACGGATAC AGTACGGGCG ATCGCTCTCA CCCCAGATGA CCAGACTTTA
ATCAGTGGGA GTGCAGACAA GACAATTAAA ATCTGGAATC TCCAGACATT CAAGTTAAAA
AGAACAATGA GTTCCTTGTC TGGTGGTATT TGGTCACTGG CTATCAGCAG CGACGGACAA
ACACTGGTCA CCGTTCACGA AAATGGTAGT ATCCAAATTT GGAACTTTCC CACAGGACAA
CTCCTCCGCA CAATTAAGGG ACATCAAGGT CGGGTTTTCT CTGTGGCGAT GAGTCCTGAC
GGGGAGACTT TCGCTACTGG TGGCATTGAT AAAAACATCA AAATTTGGAA CTTATATACA
GGGGAATGCC TCCGCACGAT CGCCGAACAT CAAGACGCAG TAAGAGCGTT AGTTTTCAGC
CACGATGGTA AGATGCTCGT TAGTAGTAGT TGGGATCAAA CCATTAAGAT TTGGCAGATG
CCCACAGGTA AATTGCTCCA TACCCTCCTG GGGCATACTT CACGAGTAGT AACTCTGAGT
TTGGGAATTG CTGAACAAAC CCTTGTCAGT GGCAGCCTCG ACAACAAGCT CAAAATCTGG
AACCTGCAAA CAGGTAAATT ACTTGAAACC CTATCTGGAC ATTCTGACTG GATTTTAGCG
ATCGCCACCA ACCCTGCAAA GCAAATCTTA GTAAGTAGCG CTAAAGATAA AACTATCAGA
GTTTGGCAGC CGCAAATTAT TGGTAGGTGA
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| Protein sequence | MTPLNLGQLV YTSFAIAGLR TVASKEVPPE IQQAFLEKVV YQYWDAYNPP SAGYRAAYLL
QVTSEDNLFG WLYNDGLDDF GRSDVPYFLC YYLPGKLHPS QLENIFICLC TGPITIVDRQ
NLPVSLESLV TQNLWSYQPT RAGVKIPRQV IEESQITLKQ EELLNLFVCA SQDEIKDTSI
ADRNLLIVSK QKIRLLDTPT TPNQAITQQE LPLAVRIAEN DHQMPAAKTH LTDNQKAVFP
FPGKLTLMLG TIATVVSLLT LNYFLKIAPF AGTVQKVTAP IPTPNPPVDQ QSTTLTKTLF
GHTDSVWSVA LTKDGQTLMS ASEDKTIKVW NLDTAKVTTT LQGHTDTVRA IALTPDDQTL
ISGSADKTIK IWNLQTFKLK RTMSSLSGGI WSLAISSDGQ TLVTVHENGS IQIWNFPTGQ
LLRTIKGHQG RVFSVAMSPD GETFATGGID KNIKIWNLYT GECLRTIAEH QDAVRALVFS
HDGKMLVSSS WDQTIKIWQM PTGKLLHTLL GHTSRVVTLS LGIAEQTLVS GSLDNKLKIW
NLQTGKLLET LSGHSDWILA IATNPAKQIL VSSAKDKTIR VWQPQIIGR
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