Gene Ava_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1539 
Symbol 
ID3682310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1888305 
End bp1888838 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content40% 
IMG OID637716879 
ProductDual specificity protein phosphatase 
Protein accessionYP_322057 
Protein GI75907761 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0521424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.144232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAT TTGCTCCTGC TTGCGAACAA GAGACAATTG TATTTGGTGC TGCCCGTCCT 
GGTTACTCAG ACCAAGAAGT ATACAATTGG ATAGAGTTTA TGCGGCAGCA AAATATAAAA
CGAGTATGTT GTCTTCTATC TAATGAACAA CTAGCTGGCT ACTCTCATCT TTTAAGTACA
TATCAACAAG AATTTGGCAA TCAACAAGTT TGTTGGGCAG CAATCGCCGA TTTTCACTTA
GCTGATTTAG CAACTCTTAC AGAGAAAATA CTGCCATTTT TAATAGAAGC AGACAAACTC
AAAGAAAGAG TTGTTGTTCA CTGTTCTGGT GGCATTGGAC GTACTGGCCA TGTGTTAGCT
GCGTGGTTGG TTTGTGGTAG AGGGTTTGCA AATCAAGATG CTATAGCCGC CGTCAAATGT
ACAGGGAGAA ATCCTCATGA AGCTGTAATC GCTGCTGTAT TCCAAGGTAA AAATCCCTTA
ACAGTTGCCA AAGAACTTGA TTTTCTGCTG AATAATTGTC GGATATTAAC GTGA
 
Protein sequence
MYKFAPACEQ ETIVFGAARP GYSDQEVYNW IEFMRQQNIK RVCCLLSNEQ LAGYSHLLST 
YQQEFGNQQV CWAAIADFHL ADLATLTEKI LPFLIEADKL KERVVVHCSG GIGRTGHVLA
AWLVCGRGFA NQDAIAAVKC TGRNPHEAVI AAVFQGKNPL TVAKELDFLL NNCRILT