Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1539 |
Symbol | |
ID | 3682310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1888305 |
End bp | 1888838 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716879 |
Product | Dual specificity protein phosphatase |
Protein accession | YP_322057 |
Protein GI | 75907761 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0521424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.144232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAT TTGCTCCTGC TTGCGAACAA GAGACAATTG TATTTGGTGC TGCCCGTCCT GGTTACTCAG ACCAAGAAGT ATACAATTGG ATAGAGTTTA TGCGGCAGCA AAATATAAAA CGAGTATGTT GTCTTCTATC TAATGAACAA CTAGCTGGCT ACTCTCATCT TTTAAGTACA TATCAACAAG AATTTGGCAA TCAACAAGTT TGTTGGGCAG CAATCGCCGA TTTTCACTTA GCTGATTTAG CAACTCTTAC AGAGAAAATA CTGCCATTTT TAATAGAAGC AGACAAACTC AAAGAAAGAG TTGTTGTTCA CTGTTCTGGT GGCATTGGAC GTACTGGCCA TGTGTTAGCT GCGTGGTTGG TTTGTGGTAG AGGGTTTGCA AATCAAGATG CTATAGCCGC CGTCAAATGT ACAGGGAGAA ATCCTCATGA AGCTGTAATC GCTGCTGTAT TCCAAGGTAA AAATCCCTTA ACAGTTGCCA AAGAACTTGA TTTTCTGCTG AATAATTGTC GGATATTAAC GTGA
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Protein sequence | MYKFAPACEQ ETIVFGAARP GYSDQEVYNW IEFMRQQNIK RVCCLLSNEQ LAGYSHLLST YQQEFGNQQV CWAAIADFHL ADLATLTEKI LPFLIEADKL KERVVVHCSG GIGRTGHVLA AWLVCGRGFA NQDAIAAVKC TGRNPHEAVI AAVFQGKNPL TVAKELDFLL NNCRILT
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