| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1534 |
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| Symbol | |
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| ID | 3682305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1881708 |
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| End bp | 1883867 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716874 |
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| Product | RNA binding S1 |
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| Protein accession | YP_322052 |
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| Protein GI | 75907756 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.264491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.667441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA TTCCTCAACT ACTGGCAACT GAACTAGAAC TCAAACCCTT TCAGGTGCAA
AATGCGCTGG AACTTTTGGC GGAGGGTGCG ACTATTCCTT TTATTTCCCG TTATCGCAAA
GAACGCACTG GTGAAATGAA TGAGGTGCAG TTGCGTGATT TAGCTGATAG GTATACTTAC
TTAACGGAAT TAGAAGAAAG AAAGTCGGTA ATTTTGAAAG CTATTACCGA ACAGAATAAA
CTGACGGATG AACTACAAGA GAAAATCGTC TCTTGTTTAC AAAAAACTGA ACTTGAGGAT
TTATACTTAC CCTATCGTCC TAAGCGCCGG ACTCGCGCCA CTATTGCTAG AGAGAAGGGA
TTACAACCTT TAGCGGATTT CATTAAGTCT TTAAATACTA AAAACCCCGT TTCTGCATCA
TTATCGGAAG AAGCAGCAAG ATATATTTCT GAAACTCAGG GAGTCACCAG CGCCGATGAA
GCACTAAAAG GTGCGGCTGA TATTTTAGCG GAGGAAGTGG CAGAAAAGGC TGATTTACGT
GCCTATATTC GAGATTATCT CTTAGAAGAT GGGGTGTTTG TTTCTCGTAT TAAAGATGAT
TACCCGGAAG GTACAACCAA GTTTGAAATG TACCGCAACT ATCAAATTAA TGTGAAAAAT
ATTGCCCCCC ACAATTTGCT GGCGTTGTGT CGGGGTGAAA CTGAGGGAAT ATTAAGCTTT
GATGTGGTAT TTGCAGAAGA TTGGGTTCTT TCTTACTTAG AATCTCAAGA AATTAAAACA
AAAGTGCAGG GAATTCGGGA TTTCTATCAA GCGATGCTGA AAGATGCGTT CAACCGTTTG
ATGAAAAATT CCCTTATCAG TGAAGTCATT GCTGATAAGA AAACCTATGC GGATATTGAG
TCTATTCGGA CATTTGAAAT CAATTTGCGT GAATTGTTGC TATCTGCGCC GGCGGGAATG
AAACCAACTA TGGCTATTGA CCCTGGGTTT AGAACTGGCT GTAAAGTGGC AATTATTGAC
CAAACTGGGA AATTTCTGGA ATATCAAGCG GTATTTCCTC ACCAAGCTGC GGAACAACGG
ACAAAAGCGG CTCAAATTCT CAAAAATCTG ATTGAAAAAT ACAAAATTGA GTTAATAGCC
ATTGGTAATG GTACAGCATC ACGGGAAACA GATGAGTTTG TCATGCAGGT ATTACAAACA
CTAGACCGTA AACCTACCAA GGTGATGGTC AATGAATCTG GTGCATCTAT ATATTCTGCT
AGCAAAGTCG CACTGGAAGA GTTTCCTGAT TTAGATGTGA CGGTGCGGGG TGCAATTAGT
ATTGGTCGGC GTTTGCAAGA CCCGTTAGCG GAATTGGTGA AAATAGATCC GAAATCGATT
GGTGTGGGAC AATACCAGCA TGATGTTGAT CAGAAATTGT TGAAGAAGAA GTTAGATGAG
ACTGTAGAAA GCTGCGTTAA CTACGTGGGT GTAGATTTAA ATACCGCTTC TAAGGAACTG
TTAACTTTTG TTTCGGGAAT TACACCAGCA GTCGCTAATA ATATTGTGGC TTACCGTAAC
CAGTATGGAG CTTTTAAAAA TCGTCGCCAA CTTTTGAAGG TTCCCAAGTT GGGGCCGAAA
GCTTTTGAAC AGGCGGCGGG GTTCCTAAGG ATTCGTGGCG GTGATAACCC TTTGGATAAT
ACAGCAGTGC ATCCAGAAAG TTATGCAGTA GTGGAAGCGA TCGCCTCTGA CTTAAGTGTA
ACTTTAAATC AGGTAACACA AATTGCCGAA AAACTCAAAA AAGCCAACTT GAAGAAATAT
GTCACCGATA CAGTTGGTGA ACCGACACTG CGGGACATTC TCAGCGAATT AGAAAAACCG
GGGAGAGACC CCCGTGCAGA ATTTAAGTAC GCCACCTTCA AGGAAGGGAT TAAAGAAATC
ACCGACTTGC AAGAAGGGAT GGAATTGGAA GGGATTGTCA CCAATGTTGC TAACTTTGGT
GCGTTCGTCG ATATTGGTGT TCATCAAGAT GGTTTGGTGC ATATCTCTCA ACTGACTGAT
AGATTTGTTG ATGACCCCAA GAAAGTTGTC AAGGTGGGAC AAGTGGTTAA GGTGAGAGTG
CTGGAAGTCA ACGCCAAATT GAAAAGAATT AGTTTGTCGA TGAAAGCAGT GAAGCAATAG
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| Protein sequence | MLNIPQLLAT ELELKPFQVQ NALELLAEGA TIPFISRYRK ERTGEMNEVQ LRDLADRYTY
LTELEERKSV ILKAITEQNK LTDELQEKIV SCLQKTELED LYLPYRPKRR TRATIAREKG
LQPLADFIKS LNTKNPVSAS LSEEAARYIS ETQGVTSADE ALKGAADILA EEVAEKADLR
AYIRDYLLED GVFVSRIKDD YPEGTTKFEM YRNYQINVKN IAPHNLLALC RGETEGILSF
DVVFAEDWVL SYLESQEIKT KVQGIRDFYQ AMLKDAFNRL MKNSLISEVI ADKKTYADIE
SIRTFEINLR ELLLSAPAGM KPTMAIDPGF RTGCKVAIID QTGKFLEYQA VFPHQAAEQR
TKAAQILKNL IEKYKIELIA IGNGTASRET DEFVMQVLQT LDRKPTKVMV NESGASIYSA
SKVALEEFPD LDVTVRGAIS IGRRLQDPLA ELVKIDPKSI GVGQYQHDVD QKLLKKKLDE
TVESCVNYVG VDLNTASKEL LTFVSGITPA VANNIVAYRN QYGAFKNRRQ LLKVPKLGPK
AFEQAAGFLR IRGGDNPLDN TAVHPESYAV VEAIASDLSV TLNQVTQIAE KLKKANLKKY
VTDTVGEPTL RDILSELEKP GRDPRAEFKY ATFKEGIKEI TDLQEGMELE GIVTNVANFG
AFVDIGVHQD GLVHISQLTD RFVDDPKKVV KVGQVVKVRV LEVNAKLKRI SLSMKAVKQ
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