Gene Ava_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1527 
Symbol 
ID3682298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1876260 
End bp1877414 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID637716867 
Productglycosyl transferase, group 1 
Protein accessionYP_322045 
Protein GI75907749 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.161562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGTC TTTTATTCAT TACAGAAAGA TTTGCCCCAG ACTTAGGCGG TTTGGCGACT 
AGTGCCACAC GGCTAGTAAC AACACTGTCC CAATTAGGCG TAGAAGTTGA TGTTGTCAGT
TGGAGTCGTT ACTTGCAACC AGGGGAAGTC TCACCACCCA CATCTTTAGA TGCACAACCC
CGCGTCTATC GTATCGGCTT ATATCGCCAT TGGGATATGA CAATGCCCCA CACCCTCAAT
TTTTTAGAGT GGCTGCATCA AACTCGCGCC TACGATGGAG TTTGGGGACA TTACTTATTT
CCTAGCGGTT TCTTAGCTAC TTGGTTTGCT GCCTTGCAAG GAATAGCCAG TACAGTTAGC
GCCCGTGGTA ACGATATTGA CCGGGAAATG TTTCCCCCTG GAGATTTTGC CCGGTTGCAA
TGGACACTGC AACACGCCAA AGTAATCACC GCCGTGAGTG CGGATATGGC GCGGAAAATT
CAGCTATTGA GTGGAAGAGA TGATGTTTTG GTGTTGAAAA ATGCCGTGGA CACAGATATT
TTTGCACCAT TGGCGGAAAC TAATCTGCGG GCCACTTTAG GAATTGCCCC CGATGAAGTG
GTTTTAGGAT TTTGTGGAGA ATTGCGGGAA AAAAAAGGAC AACAGTTTCT CCTCAATGCC
TTAACAACAG TCCGCCAACA GCGTCCGGCT TGTCTGTTAA TTATTGGTGA AGTGAGGACT
TCTCAAGAAT CGGTGTTGCA ATTATATGCC AGTCAGCAGC CAGAAGATGC CCAAAGGGTG
ATTGTTACCG GACATTTGGC TGATGCACAA GCAGTTGCAG CCTATCTACA GTTATGCGAT
GTTTACCTCC AGCCTTCCTT GTGGGAAGGT ATGCCCAATG CACTGTTAGA AGCGATGGCT
TGCGGTTGCT GTTGTATCGC CAGTGATGCA GGTGGTATTC CAGAGGTGAT TTTACATGGT
GAAAATGGCT TTTTACTGCC TCGTTCTCAT CTCCATAAGT TAGGTGAGGC GGTGTTGGAG
TGTTTGGAAA TGCCCGCAGG AGAGAAAAAT TCCATTCAAC AAGCAGCACG CGATCGCATC
CTCACCAATT ATTCTATCTC TCAAGAACGA CAGCAACTAC AAATTGTCAT TAATTGTTTA
GTCAATAGTC AGTAA
 
Protein sequence
MTRLLFITER FAPDLGGLAT SATRLVTTLS QLGVEVDVVS WSRYLQPGEV SPPTSLDAQP 
RVYRIGLYRH WDMTMPHTLN FLEWLHQTRA YDGVWGHYLF PSGFLATWFA ALQGIASTVS
ARGNDIDREM FPPGDFARLQ WTLQHAKVIT AVSADMARKI QLLSGRDDVL VLKNAVDTDI
FAPLAETNLR ATLGIAPDEV VLGFCGELRE KKGQQFLLNA LTTVRQQRPA CLLIIGEVRT
SQESVLQLYA SQQPEDAQRV IVTGHLADAQ AVAAYLQLCD VYLQPSLWEG MPNALLEAMA
CGCCCIASDA GGIPEVILHG ENGFLLPRSH LHKLGEAVLE CLEMPAGEKN SIQQAARDRI
LTNYSISQER QQLQIVINCL VNSQ