Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1527 |
Symbol | |
ID | 3682298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1876260 |
End bp | 1877414 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637716867 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_322045 |
Protein GI | 75907749 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.161562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTC TTTTATTCAT TACAGAAAGA TTTGCCCCAG ACTTAGGCGG TTTGGCGACT AGTGCCACAC GGCTAGTAAC AACACTGTCC CAATTAGGCG TAGAAGTTGA TGTTGTCAGT TGGAGTCGTT ACTTGCAACC AGGGGAAGTC TCACCACCCA CATCTTTAGA TGCACAACCC CGCGTCTATC GTATCGGCTT ATATCGCCAT TGGGATATGA CAATGCCCCA CACCCTCAAT TTTTTAGAGT GGCTGCATCA AACTCGCGCC TACGATGGAG TTTGGGGACA TTACTTATTT CCTAGCGGTT TCTTAGCTAC TTGGTTTGCT GCCTTGCAAG GAATAGCCAG TACAGTTAGC GCCCGTGGTA ACGATATTGA CCGGGAAATG TTTCCCCCTG GAGATTTTGC CCGGTTGCAA TGGACACTGC AACACGCCAA AGTAATCACC GCCGTGAGTG CGGATATGGC GCGGAAAATT CAGCTATTGA GTGGAAGAGA TGATGTTTTG GTGTTGAAAA ATGCCGTGGA CACAGATATT TTTGCACCAT TGGCGGAAAC TAATCTGCGG GCCACTTTAG GAATTGCCCC CGATGAAGTG GTTTTAGGAT TTTGTGGAGA ATTGCGGGAA AAAAAAGGAC AACAGTTTCT CCTCAATGCC TTAACAACAG TCCGCCAACA GCGTCCGGCT TGTCTGTTAA TTATTGGTGA AGTGAGGACT TCTCAAGAAT CGGTGTTGCA ATTATATGCC AGTCAGCAGC CAGAAGATGC CCAAAGGGTG ATTGTTACCG GACATTTGGC TGATGCACAA GCAGTTGCAG CCTATCTACA GTTATGCGAT GTTTACCTCC AGCCTTCCTT GTGGGAAGGT ATGCCCAATG CACTGTTAGA AGCGATGGCT TGCGGTTGCT GTTGTATCGC CAGTGATGCA GGTGGTATTC CAGAGGTGAT TTTACATGGT GAAAATGGCT TTTTACTGCC TCGTTCTCAT CTCCATAAGT TAGGTGAGGC GGTGTTGGAG TGTTTGGAAA TGCCCGCAGG AGAGAAAAAT TCCATTCAAC AAGCAGCACG CGATCGCATC CTCACCAATT ATTCTATCTC TCAAGAACGA CAGCAACTAC AAATTGTCAT TAATTGTTTA GTCAATAGTC AGTAA
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Protein sequence | MTRLLFITER FAPDLGGLAT SATRLVTTLS QLGVEVDVVS WSRYLQPGEV SPPTSLDAQP RVYRIGLYRH WDMTMPHTLN FLEWLHQTRA YDGVWGHYLF PSGFLATWFA ALQGIASTVS ARGNDIDREM FPPGDFARLQ WTLQHAKVIT AVSADMARKI QLLSGRDDVL VLKNAVDTDI FAPLAETNLR ATLGIAPDEV VLGFCGELRE KKGQQFLLNA LTTVRQQRPA CLLIIGEVRT SQESVLQLYA SQQPEDAQRV IVTGHLADAQ AVAAYLQLCD VYLQPSLWEG MPNALLEAMA CGCCCIASDA GGIPEVILHG ENGFLLPRSH LHKLGEAVLE CLEMPAGEKN SIQQAARDRI LTNYSISQER QQLQIVINCL VNSQ
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