Gene Ava_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1517 
Symbol 
ID3682483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1865572 
End bp1866666 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content37% 
IMG OID637716857 
Producthypothetical protein 
Protein accessionYP_322035 
Protein GI75907739 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000966752 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TTGAAGTTGA AAAAAGAACT ATTTTAGTTG GTTTGGCTGG TAGCCACGGG 
TATGGATTAA ATCGTCCTGA TTCTGATTTA GATTTTAGGG GGGTGTTTAT TGCACCTAAA
AGATATTATT TGGGATTTGA CCACATAGAA CAAAAGGATG CAGGCTGGGA TGAGCCGGGA
ATATTTCCTT TGCTGGATGG GAATAAAGAT ACGGTTATAT ATGAATTAAG GAAAATACTC
CAGTTGTTGT CGGGAGCTAA TCCTAATGTT TTGGAGTTGT TATGGTTAAA TGAGTATCCT
GTATTAAGGG ATGTCGGACA ACATTTAATC AATCATCGGA AATTATTTTT AAGTAAAAAG
GTTAAACATA CTTATTCAGG CTATGCTTTT GCTCAAATTA AAAAGATGGA GACTCATCGT
AAGTGGTTAT TAAATCCACC AGAGAAGAAA CCACTACCAT CTGATTTTGG CATAGAAGAT
GAAGCACCAC TAATTAAGGA TGATTTGAAT GCTTTTTTGG AGTATCTTTA TACTTTGATT
AGAGGTAGGA TTGAATTTCT AGAGGAAGCA GAACAATTAT ATAAGTTATT AACTGCTGAT
ATTGATTTTA AAGGAGTGCT AAAACAGTAT ACTTTACCTG ATGAAAGTTT AGAATATACG
CAAAATTTAA CTAATAGCCG TAAAGATTTT ATTCGGTTGT TACAAAAAAG CCAAAATTAC
CAAATAGCTT TGAGGGAATG GAAAGCTTAT TTAAGTTGGC AAGAAAATCG TAACCCGGCT
AGGGCGGAGA TGGAGAGGAA GTCTGGCTTT GATCTCAAGC ATGGGATGCA CTGCATTCGC
TTGTTACGCA GTGGTTTGGA AATATTAAAG ACTGGAGAAA TAACTGTAGA TAGGAGAGTT
GCGGGTGATG TTGAGGATTT AAAAGCTATC CTCAAGGGTG AGTATTCTTA TCAGCAGGTG
ATGGAAATGG CTAATGATTT GGTTGCTCAA ATGGATGCGG CTTATGAACA GTCAACTATA
CCCCATAAAC CTGATTTAGA GGCAATTAAT AGTTTGTGTA TGGAGTTAGT GGAAATGCAA
GGGTGGGGAG AGTAA
 
Protein sequence
MKRIEVEKRT ILVGLAGSHG YGLNRPDSDL DFRGVFIAPK RYYLGFDHIE QKDAGWDEPG 
IFPLLDGNKD TVIYELRKIL QLLSGANPNV LELLWLNEYP VLRDVGQHLI NHRKLFLSKK
VKHTYSGYAF AQIKKMETHR KWLLNPPEKK PLPSDFGIED EAPLIKDDLN AFLEYLYTLI
RGRIEFLEEA EQLYKLLTAD IDFKGVLKQY TLPDESLEYT QNLTNSRKDF IRLLQKSQNY
QIALREWKAY LSWQENRNPA RAEMERKSGF DLKHGMHCIR LLRSGLEILK TGEITVDRRV
AGDVEDLKAI LKGEYSYQQV MEMANDLVAQ MDAAYEQSTI PHKPDLEAIN SLCMELVEMQ
GWGE