Gene Ava_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1511 
Symbol 
ID3682477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1859789 
End bp1860697 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content45% 
IMG OID637716851 
Productribonuclease H 
Protein accessionYP_322029 
Protein GI75907733 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00182171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC AACCGATAAT TGAAAGTATA TACACTGATG GTGCTTGCAC TGGCAATCCT 
GGTCCTGGTG GCTGGGGTGT AGTTGTATAT TTTAGTGATG GTTCAGTTCA CGAAATGGGC
GATGCTGCCA AGCATACCAC CAATAATAAG ATGGAGATGC AGGCAGCGAT CGCCGCTCTC
AAATTTCTCC ACGACTCTGG ACAAACTGAA CCCATTACCC TCTATACCGA TAGTGAGTAT
CTAATTAACT GCGTTACCAA ATGGGTAAAA GGTTGGAAAA AAAAGGGCTG GAAAAAATCT
GATGGCAACC CAGTTCAGAA TCAAGACCTT CTAGAAACTT TAGATGAATT AAATAGCCGT
AAGGTAAATT GGCATCATGT TCGCGGTCAT TCTGGCAACA TCGGTAACGA ACGTTGTGAT
GTGATTGCTC GCTGTTTTGC AACTGGTAGA ATGCCCTCTC TACAACAGTT ATCCACCCGT
CATGCTCATA AATCTTTACC TGACATCAGT AAAATAAATG TAGTTAAAGT ACCTGATCAT
GTTACAACCT CTACAATAGT TCACAAAACG ACACAAGAAA TCAGTACTTC TGCGTCAAAT
ATCAACACTA TGGAACCATC TACCGCACAC GTTGCGGCTA CAATCGAGGA AAACCCGCCG
GAAAAGCGGG TGGAACAACT CCGCAACTTA GTAGAAACTC TGCATATTGC AGACGAAATT
GCGGCGAAGG GTTATTTAAT CACCAGTTCT GAGTTGGCAG ACTTAATGGA TGTCCACGCC
AGTGCTGTTA CTAGTAGGGG AGATCAGTGG CGTTGGCGCA ACTGGATTGT TTCACGGGTA
CGCCGTGAGG GTAATCAAAT TCTCTGGGAA TTAGAGCGAG GCGATCGCTT AGGGGGTGAA
GATGAATGA
 
Protein sequence
MSTQPIIESI YTDGACTGNP GPGGWGVVVY FSDGSVHEMG DAAKHTTNNK MEMQAAIAAL 
KFLHDSGQTE PITLYTDSEY LINCVTKWVK GWKKKGWKKS DGNPVQNQDL LETLDELNSR
KVNWHHVRGH SGNIGNERCD VIARCFATGR MPSLQQLSTR HAHKSLPDIS KINVVKVPDH
VTTSTIVHKT TQEISTSASN INTMEPSTAH VAATIEENPP EKRVEQLRNL VETLHIADEI
AAKGYLITSS ELADLMDVHA SAVTSRGDQW RWRNWIVSRV RREGNQILWE LERGDRLGGE
DE