| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1504 |
|---|
| Symbol | |
|---|
| ID | 3682470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1851606 |
|---|
| End bp | 1852355 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637716844 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_322022 |
|---|
| Protein GI | 75907726 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000137172 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTTA ATTTTGTGAC TACTATTAAA TGTAGAGATA TCGCATTTAC TAATATTCAA
GCGATTTTAT TTGATAAAAA CGGTACGCTA GAAAATTCAG AAGTCTATTT GCGATCGCTT
GGACAAAAAG CAGCGAGAAT TATAGATGCC CAAGTACCAG GAATTGGGGA ACCTTTATTA
ATGGCCTTTG GTATTAACGG CGATACACTC GACCCAGCCG GTTTAATGTC GGTAGCCAGT
CGCCGCGAAA CAGAAATAGC CACAGCCGCC TATATTGCCG AAACTGGGAA AGGATGGTTT
GAGTCATTAA AAATAGCGCG TCAAGCCTTA GATGATGCCG AAAAATATAT TGGTGTAACT
CCTGCACCTC TTTTCACTGG TGCATTAGAA GTATTGCAAT CTCTCTCACA AGCCGGACTA
AAACTTGGCA TTGTTTCAGC AGCAACAACA TCAGAAGTAA AAAACTTTGT CGCACAACAT
AACTTAAGTA GTTATATCCA AGCCCAAGTA GGTGTAGATA ACGGCCCCAG TAAGCCAGAC
CCCATATTAT TTTTACAAGC TTGCCAAGCT TTAGGAGTAG AACCAGAAGC CACATTAATG
GTAGGTGATG CTGTAGGTGA TATGCAAATG GCTCGTAACG CTCAAGCCGC AGGTTGTATT
GGTATTACTT GGGTGAATAA ACCAGATAAT GTCCAAGGTG CGGATGTAGT GATTAATCGG
CTAGATGAAA TTCAAATTTT AGAAAGCTAA
|
|---|
| Protein sequence | MGLNFVTTIK CRDIAFTNIQ AILFDKNGTL ENSEVYLRSL GQKAARIIDA QVPGIGEPLL
MAFGINGDTL DPAGLMSVAS RRETEIATAA YIAETGKGWF ESLKIARQAL DDAEKYIGVT
PAPLFTGALE VLQSLSQAGL KLGIVSAATT SEVKNFVAQH NLSSYIQAQV GVDNGPSKPD
PILFLQACQA LGVEPEATLM VGDAVGDMQM ARNAQAAGCI GITWVNKPDN VQGADVVINR
LDEIQILES
|
|---|
| |