Gene Ava_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1494 
Symbol 
ID3682499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1841220 
End bp1841510 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content47% 
IMG OID637716834 
ProductXRE family transcriptional regulator 
Protein accessionYP_322012 
Protein GI75907716 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGC AAGTCCTGAG AGAGCGTGCG GGTCTCAGCC GTGCAGAAGT TGCCTTCAGG 
CTTGCAATCA GTGAAACCAG TGTCCGCAAT TGGGAAGCTG GACGCACTGA GCCAACAATG
ACACCAAAAA AATATGTGGA TGCTCTACGT ATATTCAAAT GTACACCGGA AGAACTAGCA
TCTGCCAGCG AAAAATCCAT TAATCAGCGT CATAAACGCA AGCCAGGAAG GCCGAGACGT
TTCCCTGAAA ATTCTATAGT TCAGGTAACT GATTCCCCTG TTTGCAGTTA G
 
Protein sequence
MDMQVLRERA GLSRAEVAFR LAISETSVRN WEAGRTEPTM TPKKYVDALR IFKCTPEELA 
SASEKSINQR HKRKPGRPRR FPENSIVQVT DSPVCS