| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1491 |
|---|
| Symbol | |
|---|
| ID | 3682496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1835916 |
|---|
| End bp | 1836899 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716831 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_322009 |
|---|
| Protein GI | 75907713 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA CACTATTCTT CAACGCTCTG CGGGAAGCCA TTGATGAAGA AATGGCTCGT
GATTCCAGTG TCTTCGTTCT AGGTGAAGAC GTAGGACACT ATGGTGGCTC CTACAAAGTC
ACTAAGGATT TATATAAAAA GTATGGTGAA CTCAGAATTT TAGACACTCC CATCGCCGAA
AACAGTTTTA CTGGTATGGC GGTAGGTGCT GCAATGACCG GATTGCGGCC GATAATTGAA
GGTATGAACA TGGGCTTTCT GCTCCTAGCC TTTAACCAAA TCTCCAACAA TGCGGGGATG
CTACGCTATA CTTCCGGCGG TAACTTTAAA ATTCCCTTGG TCATTCGTGG CCCTGGTGGT
GTAGGTAGAC AGTTGGGTGC AGAACACTCC CAACGCTTGG AAACATACTT CCAAGCAGTT
CCAGGGTTAA AAATCGTTAC CTGCTCTACA CCATACAACG CTAAAGGACT GCTAAAATCA
GCTATCCGCG ACGATAACCC CGTTCTATTC TTTGAACACG TCCTGCTTTA TAACTTGAAA
GAGGACTTAC CGGAAAAAGA ATACTACCTA CCTTTAGATA AGGCAGAAAT TGTCCGTTCT
GGTAAAGATG TGACAATCTT GACTTACTCG CGGATGCGTC ATCACGTCAC CCAAGCGGTA
AAAGCTTTAG AAAAACAAGG TTACGACCCA GAAGTAATTG ATTTAATATC CCTCAAGCCA
TTAGATTTAG AAACAATTGG TGCATCAATC CGCAAAACCC ACAAAGTCAT CATTGTGGAA
GAAGCCATGC GAACCGGGGG TATTGCAGCA GAACTAATCG CTTCCATTAA CGATCGCTTT
TTTGATGAAT TAGATGCGCC AGTTCTCAGG CTATCATCTC AAGATATTCC TACACCATAC
AACGGTACTC TGGAGCGCCT AACAATTGTT CAACCAGAGC AAATTGTCGA AGCTGTGCAG
AAAATGATTG CGTTGCGCGT ATAG
|
|---|
| Protein sequence | MAETLFFNAL REAIDEEMAR DSSVFVLGED VGHYGGSYKV TKDLYKKYGE LRILDTPIAE
NSFTGMAVGA AMTGLRPIIE GMNMGFLLLA FNQISNNAGM LRYTSGGNFK IPLVIRGPGG
VGRQLGAEHS QRLETYFQAV PGLKIVTCST PYNAKGLLKS AIRDDNPVLF FEHVLLYNLK
EDLPEKEYYL PLDKAEIVRS GKDVTILTYS RMRHHVTQAV KALEKQGYDP EVIDLISLKP
LDLETIGASI RKTHKVIIVE EAMRTGGIAA ELIASINDRF FDELDAPVLR LSSQDIPTPY
NGTLERLTIV QPEQIVEAVQ KMIALRV
|
|---|
| |