Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1475 |
Symbol | gmk |
ID | 3682518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1821603 |
End bp | 1822202 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716814 |
Product | guanylate kinase |
Protein accession | YP_321993 |
Protein GI | 75907697 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000468376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCAAG TTTTATCCAT CCAGAATTGT GCTACTACCA AAGAAAATCC ATCGTCAGGC AAGCTGATTG TTTTAACCGG GCCTAGTGGG GTCGGTAAAG GTACTTTAAT GCGATCGCTC CTTCAGCGTC ATCCGGAACT TTATTACTCT GTATCTGCAA CAACTCGCGC TCCCCGTCCT GGGGAAGTAA ATGGCGAAAG CTATTACTTC ATTAGCCGCA ACAAATTTGA AGAATTGCTT GCTCAAGGCG AATTTCTCGA ATCGGCAGAA TTTGCGGGTA ATTATTATGG CACTCCTCGT GAAGCTGTAC TGAACCAAAT TCAATCTGGT AAGTTAGTTG TGCTGGAAAT TGAACTAGCC GGGGCAAGAC AAATTCGTGC TTCTTTCCCT GAAGCGTTGA GTATTTTTAT TCTGCCGCCT TCCTTTGAAG AGTTGGAGAA ACGGATTCGG GGACGTGGAC AGGACTCAGA GGAAGCGATC GCCCGTCGCT TACAACGTGC CACAGAAGAG ATTCAAGCTG CGGATGAATT TGATATTCAA ATTGTGAATG ACGATTTTGA AGCTGCACTC CAGGCGATCG AAGTAGCTTT ATTTGGATAA
|
Protein sequence | MMQVLSIQNC ATTKENPSSG KLIVLTGPSG VGKGTLMRSL LQRHPELYYS VSATTRAPRP GEVNGESYYF ISRNKFEELL AQGEFLESAE FAGNYYGTPR EAVLNQIQSG KLVVLEIELA GARQIRASFP EALSIFILPP SFEELEKRIR GRGQDSEEAI ARRLQRATEE IQAADEFDIQ IVNDDFEAAL QAIEVALFG
|
| |