| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1466 |
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| Symbol | |
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| ID | 3682509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1809178 |
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| End bp | 1811061 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716805 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_321984 |
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| Protein GI | 75907688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000100817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.166489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTAC ATTGGTTACT ATCCGGTACG GTTGGAACCA TCTTCTTACT ATCGTCACCA
GCTTTAGCAG CAAGGCTAGA CTCCTGGCGA TTTGACCCTA GACAAAATCG TTTAGAGATT
AATACTAACG GCGCTGTACA ACCCAAGGCG CAACTGATTT TCAATCCGAC ACGTTTAGTT
ATTGATTTAC CCGAAACTAC ATTTGGTCAG CCCCCATCAA CACAGCCAAT AGGTGGTGCA
GTTCGGGCTA TACGTGTAGG ACAATTTGAT CCACAAACCA CGCGTATCGT CGTAGAACTC
AATCCTGGTT ACACACTCGA CCCCCAACAA GTCAAATTTG TCGGTATCAG CCCTAGTCGC
TGGACTGTGC AGTTACCTAC CCCAACAGTT GAAAGAGTCG CATCGCCAAG AGAAACTGCA
CAGCAGCCAG TACCGACCAT TCCCTCGGAA ACCGTCGTTG AGACACCCTC GGTTTTATCA
CCCAGAAATG TTTACTCTGT CACCCCAAAT ACTAGAGAAG CTCAAGTTAC TAATATTGCA
TCTGTAACTC AAATTGATAA CTTACGAGTT ACAGGCGATG GATTTTTTAT CCGTACCCGT
GGTGCTACTC CCCAAATTCA AGTTAATCGT ACAGATGATA ATCGGGTAAT TAATATCAAC
GTTGCTGGCG CATCTTTATC ACCAAACATC GAGAGAGATT TATCAATTAA TCGTTATGGT
GTTAACAACA TCCAATTGAC TCAACTGTCA ACGCAAACTG TACGTATCTC CATGCAGGTG
GATAGAAACA GTCCTGACTG GCGAGTGAGT ACTAGCAGCG TGGGTGGATT TGTGCTTCTC
CCTAGTAAAG GCATTGCCAA CTTACCCCAA AATAATACTC CCAACACCAT TTCAGCAAAT
ACCAACTCAC CAGCTACTAT TCAAGCTGTA GAACTAGGTG ATAATGGCAC ACAACTTTTA
ATTCGCTCTG ACCAAGCAGT CACAGCTAAA GGCGGCTGGG ACAGAACCTC TGGACTTTAC
CGCATCATTA TCAATAACGC TAAGTTATCT CCTAGAGTTA CAGGCCCAGC TTTTAATGCT
AACAGTCCTA TCCTCCGTGT CCGTCTGCAA CCCCAAGCAG CCGATACGGT AGTTGTTTTG
GTACAACCAG CAGCCGGAGT GCAAATAGGA GAACTTAATC AAGTAAGTAA CCAAATTTTA
GCTCTAGAAT TACAATCTTC TCGGCAATTG ATACCACCAG TAGGTTTACC ACCCCTACCA
TCAACAAATC GTAGTCAATT GCCAAATCCA AATATCGATA ATCCCATAAA TGTTCCACAA
CCAATACCCA GGTCAGTTCC CAGGGGAAGA CTTCTAGTCG TCATTGACCC TGGACATGGT
GGTAAAGATT CTGGCGCTCC TGGTTTAGGT GGATTACTAG AAAAAGATGT AGTCCTGCCC
ATTGGTTTAA GAGTAGCCGC TATTTTAGAA CAGAATGGTG TCCAAGCAGT CTTGACGAGA
AATTCTGACT TTTTCGTGGA GTTACAGGGA CGGGTAGATA TTGCCGAACG AGCCAACGCG
ACTTTGTTTG TGAGTATTCA CGCCAACTCT GTAGATGGTC GCCCTGATGT TAATGGCTTG
GAAGTATATT ACTACGATAG TGGTTATGCT TTAGCCGAAA CAGTCCGCAA GACTATTCTC
CAGAGTATTG GCACACTCAA AGACCGAGGC ACACGCAAAG CTCGGTTCTA CGTCCTGAGG
AAGAGTTCTA TGCCATCGAT TCTAGTAGAA ACAGGTTATA TGAGTGGTAG GGAAGATAAT
CCCAGACTAG GCTCACCAGA ATACCAAAAT CGTATGGCAG ATGCGATCGC TCGTGGTATC
CTGCAATATT TAAAGAGACA GTAA
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| Protein sequence | MKLHWLLSGT VGTIFLLSSP ALAARLDSWR FDPRQNRLEI NTNGAVQPKA QLIFNPTRLV
IDLPETTFGQ PPSTQPIGGA VRAIRVGQFD PQTTRIVVEL NPGYTLDPQQ VKFVGISPSR
WTVQLPTPTV ERVASPRETA QQPVPTIPSE TVVETPSVLS PRNVYSVTPN TREAQVTNIA
SVTQIDNLRV TGDGFFIRTR GATPQIQVNR TDDNRVININ VAGASLSPNI ERDLSINRYG
VNNIQLTQLS TQTVRISMQV DRNSPDWRVS TSSVGGFVLL PSKGIANLPQ NNTPNTISAN
TNSPATIQAV ELGDNGTQLL IRSDQAVTAK GGWDRTSGLY RIIINNAKLS PRVTGPAFNA
NSPILRVRLQ PQAADTVVVL VQPAAGVQIG ELNQVSNQIL ALELQSSRQL IPPVGLPPLP
STNRSQLPNP NIDNPINVPQ PIPRSVPRGR LLVVIDPGHG GKDSGAPGLG GLLEKDVVLP
IGLRVAAILE QNGVQAVLTR NSDFFVELQG RVDIAERANA TLFVSIHANS VDGRPDVNGL
EVYYYDSGYA LAETVRKTIL QSIGTLKDRG TRKARFYVLR KSSMPSILVE TGYMSGREDN
PRLGSPEYQN RMADAIARGI LQYLKRQ
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