| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1465 |
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| Symbol | |
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| ID | 3682508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1806996 |
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| End bp | 1808879 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637716804 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_321983 |
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| Protein GI | 75907687 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000155726 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0455493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTAC ACTGGTTACT ATCTGGTACT GTTGGAACTG TCTTATTACT ATCGTCGCCA
GCCTTAGCAA CAAGGTTAAA TTCTTGGCGC TTTGATGCCA ATCAAAACCG CTTGGAAATT
AATACAACAG GTGCAGTCCA ACCAAGGGCG CAACTAATTT TTAATCCCAC ACGGTTAGTA
ATAGATTTGC CAAATGTTAC ATTTGGGCGA TCGCAGTTAA CACAACCAAT CGGTGGTAGA
ATCCGCTCTG TCCGCGTAGG GCAATTTGAC CCGCAAACCA CGCGTATAGT TGTGGAAGTG
GCTCCTGGTT ATACTCTCGA TCCTCAACAA ATCAAATTTG TCGGGCTGAC CGCTAGCCGT
TGGACAGTCC AGTTACCAAC TCCCACATCG GAGCAAGCAG AGTCTTCACC AGACAACACC
TATAATGTGG TGACTATTGA CTCCAACACC AGACCAAATT TACCCAACAA CACAAGACCA
GAGTTACCGA ATAATACCAG ACCAGAGTTC TCCGATAATA CAATTAGCGC TGCACCCGGA
ACGACGCAAG TTGAAGGCTT ACAGGTGACT GGGGATGGTT TTTTTGTCCG CACCAGTGGT
GGCAATCCTC AAGTTCAAGT CATTCGCAGC CGCGATCGCG CTACTATTTT CATGGATATT
GCTGGGGCAA CTTTATCACC ACGCGCCCCA AGAAATATCC CTGTCAACAA ACATGGTGTC
AACCGAGTCG AACTTACCCC ATTACAAACC AGAACCCCAA GCGTCCGTAT GACCTTGCGG
GTAGATAGAA ATAGCCCAGA CTGGCGAGCA ACTAGCAGTA ATGCCGGTGG TTTAGTAGTT
CTACCTAGTC GTATAGTCAG ATTGCCCAAT AATGACTACA GCGAAGGTAA CACTTCAAAT
TTACCTGACA GAATACCTAC AACCAGCGCC ATTGCCACAA TTGAGTCAGT TGACCTCTCT
AGTAATGGTA CACAACTACT GATTAGAGCC GATCAAGCAG TCTCTGGTAA CAGTGGATGG
GACAGAAATA CTGGTCTATT CCGCATCACT ATTCCTAACG CCCAGTTAGC TCCCCAAGTC
ACCGGGCCGA GTTTAAATGC TAATAGTCCC ATTCTCAGAA TACGCCTGCA AAAACAAGAA
CCTAATACCG TAGTTGTTCT TGTCCAGCCA GCTGCTGGGG TGCAAGTTGG ACAACTCAAC
AAAGTTGGCA ACCAGCTTTT AGCTCTACAA TTACAAGGCT CACGTCGGCT CGCTACCACA
CCTCCCTTAC CCCCCATCCA AGGACAATTA CCAGATCCCA GCAATCCCCG CCCTCTACCC
CAGCCAGGGA CAAGACCAAT ACCCAAAGGT AGATTAGTAG TTTTGATTGA TCCCGGACAC
GGTGGTAAAG ATCCAGGAGC GATTGGTATT GGTGGAGTCC GAGAAAAAGA CATCATCTTG
CCCATCAGCC AAAGAATAGC CGAAGTCTTA CAGCAAAATG GTGTACAGGT GGTGATGGCA
AGAAATTCCG ACTATTTTGT TAGCTTACCA GGACGAGTAC AAATGGCGGA AAGAGTTGGT
GCTGATGTTT TTGTCAGTAT TCACGCCAAC TCCGCAGGCG CAGGCCGTCC CGATGTCAGT
GGTCTAGAAA CCTACTATTA TGACAGTGGT TTGAGTTTAG CTCGTGTAGT TCATAGCAGC
ATTCTCCGAA ATGTGAATGT CCGAGATAGA GGAGTACGTC GAGCCAGATT TTATGTCCTC
AGAAAAAGCT CTATGCCCTC TATTCTGGTA GAAACAGGGT ATTTAACTGG TAGAGATGAT
GCTGCTAAAC TACGAAATTC AGCTTACCAA AGACAAATGG CAGATGCGAT CGCTCGCGGT
ATTCTTCAGT ACCTCAAACG ATAA
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| Protein sequence | MKLHWLLSGT VGTVLLLSSP ALATRLNSWR FDANQNRLEI NTTGAVQPRA QLIFNPTRLV
IDLPNVTFGR SQLTQPIGGR IRSVRVGQFD PQTTRIVVEV APGYTLDPQQ IKFVGLTASR
WTVQLPTPTS EQAESSPDNT YNVVTIDSNT RPNLPNNTRP ELPNNTRPEF SDNTISAAPG
TTQVEGLQVT GDGFFVRTSG GNPQVQVIRS RDRATIFMDI AGATLSPRAP RNIPVNKHGV
NRVELTPLQT RTPSVRMTLR VDRNSPDWRA TSSNAGGLVV LPSRIVRLPN NDYSEGNTSN
LPDRIPTTSA IATIESVDLS SNGTQLLIRA DQAVSGNSGW DRNTGLFRIT IPNAQLAPQV
TGPSLNANSP ILRIRLQKQE PNTVVVLVQP AAGVQVGQLN KVGNQLLALQ LQGSRRLATT
PPLPPIQGQL PDPSNPRPLP QPGTRPIPKG RLVVLIDPGH GGKDPGAIGI GGVREKDIIL
PISQRIAEVL QQNGVQVVMA RNSDYFVSLP GRVQMAERVG ADVFVSIHAN SAGAGRPDVS
GLETYYYDSG LSLARVVHSS ILRNVNVRDR GVRRARFYVL RKSSMPSILV ETGYLTGRDD
AAKLRNSAYQ RQMADAIARG ILQYLKR
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