Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1459 |
Symbol | |
ID | 3682541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1800389 |
End bp | 1800991 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716798 |
Product | hypothetical protein |
Protein accession | YP_321977 |
Protein GI | 75907681 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000164986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000261489 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGACAC CTTCATTTAA TGGTAAATCA AAACCGCCGG CGCGAAGATT CAGCGTCCGG CGTATGCCTT TGTCGCGTTG GCATCCGGGT TTGCTTCACC TACTCGATTG GGGAGTAACG ATTGGTTCGG TATTGTTATG TTTGTTATTG TTACCAACCC GCTTACCAGG TATGGAATTG TTGGGGATTG GCCCTAATTG GCTATTAATT TGGGTGGTAG CTTGGAGTGT CAAACGTTCA GTATGGGCGG GAACTTTTGC TGGCATTGTG TTAGGGCTGC TGCAAGATGC CATTACATCC CCTCATCCGT CCCATGCCAT CACGTTGGGG TTAGTAGGCT TTTTGACTGG ATTATTACAA AAGCAGCGTT TTATCCAAGA AGATTTTATT TCTATTGCCT TAATTGTCTT TGGGATGGCA ATTTTGGCAG AAACAGTTTT TGCACTGTTA TTGACTTTAG CAGGCGATCG CCAAACAGAA TACATCTGGG CATATTATCA ACGTGTCACC CTAGCTTCTG CTATTCTCAG TAGTCTTTGG GCCCCTGTGC TGTACTATCC CTTAAACAGT TGGTGGCAAA GAATGAAAAT GTTGGAAAGT TAG
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Protein sequence | MKTPSFNGKS KPPARRFSVR RMPLSRWHPG LLHLLDWGVT IGSVLLCLLL LPTRLPGMEL LGIGPNWLLI WVVAWSVKRS VWAGTFAGIV LGLLQDAITS PHPSHAITLG LVGFLTGLLQ KQRFIQEDFI SIALIVFGMA ILAETVFALL LTLAGDRQTE YIWAYYQRVT LASAILSSLW APVLYYPLNS WWQRMKMLES
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