Gene Ava_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1459 
Symbol 
ID3682541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1800389 
End bp1800991 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID637716798 
Producthypothetical protein 
Protein accessionYP_321977 
Protein GI75907681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000164986 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000261489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACAC CTTCATTTAA TGGTAAATCA AAACCGCCGG CGCGAAGATT CAGCGTCCGG 
CGTATGCCTT TGTCGCGTTG GCATCCGGGT TTGCTTCACC TACTCGATTG GGGAGTAACG
ATTGGTTCGG TATTGTTATG TTTGTTATTG TTACCAACCC GCTTACCAGG TATGGAATTG
TTGGGGATTG GCCCTAATTG GCTATTAATT TGGGTGGTAG CTTGGAGTGT CAAACGTTCA
GTATGGGCGG GAACTTTTGC TGGCATTGTG TTAGGGCTGC TGCAAGATGC CATTACATCC
CCTCATCCGT CCCATGCCAT CACGTTGGGG TTAGTAGGCT TTTTGACTGG ATTATTACAA
AAGCAGCGTT TTATCCAAGA AGATTTTATT TCTATTGCCT TAATTGTCTT TGGGATGGCA
ATTTTGGCAG AAACAGTTTT TGCACTGTTA TTGACTTTAG CAGGCGATCG CCAAACAGAA
TACATCTGGG CATATTATCA ACGTGTCACC CTAGCTTCTG CTATTCTCAG TAGTCTTTGG
GCCCCTGTGC TGTACTATCC CTTAAACAGT TGGTGGCAAA GAATGAAAAT GTTGGAAAGT
TAG
 
Protein sequence
MKTPSFNGKS KPPARRFSVR RMPLSRWHPG LLHLLDWGVT IGSVLLCLLL LPTRLPGMEL 
LGIGPNWLLI WVVAWSVKRS VWAGTFAGIV LGLLQDAITS PHPSHAITLG LVGFLTGLLQ
KQRFIQEDFI SIALIVFGMA ILAETVFALL LTLAGDRQTE YIWAYYQRVT LASAILSSLW
APVLYYPLNS WWQRMKMLES